Caenorhabditis elegans Maupas (nematode) [CEL]

FULL NAME: DNA-directed RNA polymerase subunit


STRUCTURE SIMILARITY:
Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.


RELATED PATHWAY(S):
transcription


Amino acids sequence

        10         20         30         40         50         60
MYLQLKSKLE NVLSYFFRKM SQGYDNYDDM YDQNGASPAP SQNEKPGKSG PGFVGIKFCP
        70         80         90        100        110        120
ECNNMLYPRE DKESRVLMYS CRNCEHREVA ANPCIYVNKL VHEIDELTQI VGDIIHDPTL
       130        140        150        160
PKTEEHQCPV CGKSKAVFFQ AQTKKAEEEM RLYYVCASQD CQHRWTE 

Encoded by rpb-9 gene

FULL NAME: RNA Polymerase II (B) subunit


Nucleic acid sequence

        10         20         30         40         50         60
atgtatctgc aattaaaatc aaagcttgaa aatgttttat catatttttt cagaaagatg
        70         80         90        100        110        120
agccaagggt atgataatta cgatgatatg tacgatcaaa acggtgcatc accggcgccg
       130        140        150        160        170        180
agtcaaaacg aaaaacccgg gaaaagtggg cctggttttg ttggaatcaa gttttgccca
       190        200        210        220        230        240
gaatgcaata atatgctgta cccacgagag gataaggaat cacgagtttt gatgtattcc
       250        260        270        280        290        300
tgccggaact gtgagcatcg tgaagtcgcc gctaacccgt gtatctatgt gaataagctc
       310        320        330        340        350        360
gttcacgaaa ttgatgagct cactcaaatc gtcggagata ttattcacga tccaacgctc
       370        380        390        400        410        420
ccgaagactg aagaacatca atgtccagtc tgtggcaaaa gtaaggctgt cttcttccag
       430        440        450        460        470        480
gctcaaacaa aaaaggcaga agaagagatg agattgtact atgtatgtgc atcgcaagat
       490        500
tgtcagcaca gatggacgga ataa   

Last modification date: Oct. 2, 2011