Arabidopsis thaliana (L.) Heynh. (mouse-ear cress) [ATH]


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MVTKESIEVI AQSIGLSTLS PDVSAALAPD VEYRVREVMQ EAIKCMRHAR RTTLMAHDVD
        70         80         90        100        110        120
SALHFRNLEP TSGSKSMRFK RAPENRDLYF FDDKDVELKN VIEAPLPNAP PDASVFLHWL
       130        140        150        160        170        180
AIDGIQPSIP QNSPLQAISD LKRSEYKDDG LAARQIYFDK VTEWALTQSG STLFRQALAS
       190        200        210        220        230        240
LEIDPGLHPL VPFFTSFIAE EIVKNMDNYP ILLALMRLAR SLLHNPHVHI EPYLHQLMPS
       250        260        270        280        290        300
IITCLIAKRL GRRSSDNHWD LRNFTASTVA STCKRFGHVY HNLLPRVTRS LLHTFLDPTK
       310        320        330        340        350        360
ALPQHYGAIQ GMVALGLNMV RFLVLPNLGP YLLLLLPEMG LEKQKEEAKR HGAWLVYGAL
       370        380        390        400        410        420
MVAAGRCLYE RLKTSETLLS PPTSSVWKTN GKLTSPRQSK RKASSDNLTH QPPLKKIAVG
       430        440        450        460        470        480
GIIQMSSTQM QMRGTTTVPQ QSHTDADARH HNSPSTIAPK TSAAAGTDVD NYLFPLFEYF
       490
GESMLMFTPT HELSFFL    

Encoded by TAF6B gene


OTHER NAME(S):
F20D21.18
F20D21_18
TAF6B
TAF6B1
TAF6B2
TAF6B3
TAF6B4
TBP-ASSOCIATED FACTOR 6B
TBP-ASSOCIATED FACTOR 6B1
TBP-ASSOCIATED FACTOR 6B2
TBP-ASSOCIATED FACTOR 6B3
TBP-associated factor 6B4


DESCRIPTION:
Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6.


Nucleic acid sequence

        10         20         30         40         50         60
atggtgacga aagaatccat tgaagtgata gctcagagca ttggactctc cactctttct
        70         80         90        100        110        120
ccggacgtct cagccgctct tgctcccgat gtcgagtatc gcgtccgaga ggtcatgcag
       130        140        150        160        170        180
gaagctatca aatgcatgcg tcatgctcga cgcaccactt taatggctca tgatgtcgat
       190        200        210        220        230        240
tctgctcttc atttcaggaa tttggagcct acctctggct ccaaaagtat gcggttcaag
       250        260        270        280        290        300
agagctcctg agaacagaga tctatacttc ttcgatgaca aagatgtcga gctcaagaat
       310        320        330        340        350        360
gttatcgaag ctcctctacc aaatgcacct cctgatgcat ctgttttctc attggttggc
       370        380        390        400        410        420
aattgatggt attcaacctt ccattccaca gaattctcct ctccaagcca tatctgacct
       430        440        450        460        470        480
taaacgatcg gaatataagg acgatggctt ggctgctaga cagatttact ttgacaaagt
       490        500        510        520        530        540
cacggagtgg gctttgactc aatctggctc caccctcttt agacaagcac tcgccagctt
       550        560        570        580        590        600
ggaaattgat cctggactcc acccattagt tccctttttc acttctttca tcgctgaaga
       610        620        630        640        650        660
gattgtcaaa aacatggata attatccaat cttgttggct ttgatgcgtc ttgctagaag
       670        680        690        700        710        720
cctccttcat aaccctcatg tacatattga gccatatctg catcagttga tgccgtctat
       730        740        750        760        770        780
tatcacttgc cttattgcca agcgcttagg aagaaggtca tctgataatc actgggactt
       790        800        810        820        830        840
gagaaacttc actgccagca cagttgcttc aacgtgcaaa aggtttggac acgtttatca
       850        860        870        880        890        900
caatttgttg ccacgtgtca caagatcact gcttcatacc tttttggacc caaccaaggc
       910        920        930        940        950        960
actcccacaa cactatgggg caattcaagg gatggtagcc cttgggctta atatggttcg
       970        980        990       1000       1010       1020
ctttcttgtt ctcccaaacc tagggccgta tttgctgctt cttttacctg aaatgggact
      1030       1040       1050       1060       1070       1080
tgagaagcag aaggaagaag ctaagaggca tggggcttgg cttgtttatg gagcgttgat
      1090       1100       1110       1120       1130       1140
ggtggcagct ggtcgatgcc tatatgaacg gcttaaaaca tctgagacac tgctgtctcc
      1150       1160       1170       1180       1190       1200
tccaactagc tctgtctgga agacaaatgg aaagctcacc agccccaggc aaagtaaacg
      1210       1220       1230       1240       1250       1260
caaagcaagc agtgacaact taactcatca accaccactg aagaagatag cagtaggggg
      1270       1280       1290       1300       1310       1320
aattatacaa atgagctcca cacaaatgca gatgcgcgga accacaacag tccctcaaca
      1330       1340       1350       1360       1370       1380
gtcccacaca gatgcagatg cacggcacca caatagtccc tcaacaattg ctccgaagac
      1390       1400       1410       1420       1430       1440
ttcagctgct gcaggcactg acgtcgacaa ctatctcttt cctctttttg agtattttgg
      1450       1460       1470       1480       1490
tgagagcatg cttatgttca cccccacaca tgagctcagt ttcttcttgt aa

Last modification date: Oct. 2, 2011