Schizo-saccharomyces pombe Lindner (fission yeast) [SPO]

FULL NAME: Transcription initiation factor TFIID subunit 6


DESCRIPTION:
TAFs are components of the transcription factor IID (TFIID) complex that are essential for mediating regulation of RNA polymerase transcription (By similarity).

STRUCTURE SIMILARITY:
Belongs to the TAF6 family.
Contains 1 histone-fold domain.


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MSLTVWNIES IKDVAEMLGI GNLADEPAAA IAMDLEYRIH QVVQEATKFM VHSKRTVLTS
        70         80         90        100        110        120
ADISSALRTL NVEPLYGFNN SRPLEFHEAA VGAGQNSLYY LDDEEVDFEK IINAPLPKVP
       130        140        150        160        170        180
RNISYSAHWL AIEGVQPAIP QNPTPSDHTV GEWASKGTSG VMPGASTAAK EARNGVTSMD
       190        200        210        220        230        240
NVEIKPLVRH VLSKELQLYF ERITSALLDE TNVELRDAAL SSLRDDPGLH QLLPYFIMFL
       250        260        270        280        290        300
SDSVTRNLGN LVVLTTLMHM AWALLDNPNL FVEPYVQQLM PSILTCLVAK RLGSDPNNHE
       310        320        330        340        350        360
HYALRDLAAF LLGIVCDRFG NVYYTLKPRV TRTALKAFLD NTKPYSTHYG AIKGLKTMGK
       370        380        390        400        410        420
EAIRVLVVPN IKVYEVLVRK TLEKGNEEEI YEANKCMDAL YDALLLLRDD QLPNQRTLPP
       430        440        450
NASGLLEKNV GSLMAEKIMK ENDTSLLLGL LE  

Encoded by taf6 gene


Nucleic acid sequence

        10         20         30         40         50         60
atgtccttga cagtatggaa tattgaatcc atcaaagatg ttgctgaaat gcttgggatt
        70         80         90        100        110        120
ggcaatcttg ccgatgaacc agcagcagct attgcaatgg atctcgaata tagaattcat
       130        140        150        160        170        180
caggtggttc aggaagccac taagtttatg gttcattcta aaagaactgt tttaactagc
       190        200        210        220        230        240
gcagatatct cttcagcgtt acggacgttg aatgttgagc cgttatacgg cttcaataat
       250        260        270        280        290        300
tctcgtccat tagaatttca tgaagccgct gtaggtgcag gccaaaattc cctttactac
       310        320        330        340        350        360
cttgatgatg aggaagtgga ttttgaaaaa atcataaacg ctcctctccc taaagtccct
       370        380        390        400        410        420
agaaacattt cttacagtgc acactggctg gccatcgaag gtgtgcagcc agccattcct
       430        440        450        460        470        480
caaaatccaa ctccctcaga tcacacagtt ggagaatggg catccaaggg tacttcaggg
       490        500        510        520        530        540
gttatgccag gtgcttcaac tgctgctaaa gaagctcgaa acggtgtcac ttcgatggac
       550        560        570        580        590        600
aacgttgaga taaaaccgtt ggtgcgacat gtgctatcca aagagttaca gctttatttt
       610        620        630        640        650        660
gagcgtatta ccagtgcatt gcttgatgaa actaatgttg agctccgtga tgctgcccta
       670        680        690        700        710        720
tcgagtttac gtgacgaccc cggattacac caacttttac catacttcat aatgttttta
       730        740        750        760        770        780
tcggattctg taactcgaaa cttaggaaat cttgtggttc ttactacttt aatgcacatg
       790        800        810        820        830        840
gcctgggccc ttcttgataa ccccaacctt tttgtagagc cttacgtcca acaactcatg
       850        860        870        880        890        900
ccatccatcc ttacttgttt ggtcgcgaag cgccttggca gtgatcctaa taatcacgag
       910        920        930        940        950        960
cattatgcac taagagactt agctgctttt ttactcggga ttgtttgtga tcgatttggt
       970        980        990       1000       1010       1020
aatgtgtatt atacattaaa gcctcgcgtt actcgcacgg cactcaaagc atttttggat
      1030       1040       1050       1060       1070       1080
aacaccaagc catattccac tcattatggt gccatcaaag gcttaaaaac tatggggaaa
      1090       1100       1110       1120       1130       1140
gaagctatta gagtcctcgt cgttcccaat atcaaagttt acgaagtcct agttcggaaa
      1150       1160       1170       1180       1190       1200
accttggaaa aaggaaatga agaggagatt tacgaggcca ataaatgtat ggatgctttg
      1210       1220       1230       1240       1250       1260
tacgacgctt tgctattact gcgggatgat caattaccaa atcaacgaac tcttccgcca
      1270       1280       1290       1300       1310       1320
aatgctagtg gtcttcttga gaagaacgtt ggcagtttaa tggctgaaaa gataatgaag
      1330       1340       1350
gaaaacgata cctcattgct tcttggtctg ctagaatag  

Last modification date: Oct. 2, 2011