Caenorhabditis elegans Maupas (nematode) [CEL]


STRUCTURE SIMILARITY:
Contains 1 LisH domain.


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MDSENSSSHS ISSPQMFQNT HNNSAMEDNL LSRPMNNESL QMIIGYLRRN GLTETEELLT
        70         80         90        100        110        120
REAGPVLRVE GSNGLPPEEA ISVEFDTFVQ HANDCTDVVQ AEFSQLLFPI FAHSYIALIE
       130        140        150        160        170        180
KHAATARIFF NRFKIFIPEC FSEFVYQLSL IEDAMTLRAN EHVHILRENK FLVRLSRPTL
       190        200        210        220        230        240
KHLESIQTRV IGVKNIIAKH ICIENADEVS TNRTTIETQM GGILGVTSKS DKRHKMMFSV
       250        260        270        280        290        300
LKDELMQNIE KRKTKGKDWK DMGKKMQTHC PQADRIPLPP ISEHLREERR NWLRDVGKMA
       310        320        330        340        350        360
IISAESPVSI CMYTTVNAPI GVASCDFTDD SSLIAMGLSD SSIVMNAMDP MNKMKKLRDM
       370        380        390        400        410        420
EFLDKIDIET ADNVQSQMFD LQGSTTSVRY TGHGGPVFSV NFSPDRRLLI SSAGDRTVRL
       430        440        450        460        470        480
WSMETQRNAV IYRTPAVVWQ AQFCSRGYYF ATASADKTAA MWSTDRMHPL RIFADPYGDV
       490        500        510        520        530        540
GCIDYHPNCN YIAGGSDDRY VRVWDVCSGT RVRIFSGHKA SIIAVKFSPC GRYIVSLDAI
       550        560        570        580        590        600
GNLMIWDLAY QRLVAAEITE QAGTKGSITF SRDGGVFAVS HGNSSIQLYS LDTLIGTVLA
       610        620        630        640
AGQNDSYIEP KVNLDGFNIG SYATKETAVI GLHFTRRNLL LGFGCFGQ 

Encoded by taf-5 gene

FULL NAME: TAF (TBP-associated transcription factor) family


Nucleic acid sequence

        10         20         30         40         50         60
atggatagcg agaattcgag tagtcattcg ataagttctc cacaaatgtt tcaaaacacg
        70         80         90        100        110        120
cacaacaatt cagcaatgga ggataatttg ctttctcggc caatgaacaa tgaatcactt
       130        140        150        160        170        180
caaatgatta ttggatactt acgacgaaat ggtttaacag aaactgaaga gcttttgact
       190        200        210        220        230        240
cgagaagctg gaccagtact tagagttgaa ggatctaatg gattacctcc agaagaagcg
       250        260        270        280        290        300
atatccgttg aattcgacac atttgtccag cacgcaaacg attgtacaga tgttgttcaa
       310        320        330        340        350        360
gcggaattca gtcaactttt atttcctata tttgcacaca gctatatagc tttaattgaa
       370        380        390        400        410        420
aagcatgccg caactgcccg tatattcttc aatcgattca agattttcat tcctgaatgt
       430        440        450        460        470        480
ttctcggaat ttgtatatca attatcacta atcgaagatg caatgacgtt acgagccaat
       490        500        510        520        530        540
gaacatgttc acattttacg agaaaataaa tttcttgttc gactttcgag gccaacactg
       550        560        570        580        590        600
aaacatcttg aatcaattca aacgagagtg attggtgtta agaatataat tgcaaaacat
       610        620        630        640        650        660
atttgtattg aaaatgctga cgaagtatcc acaaatcgaa cgacaataga aacccaaatg
       670        680        690        700        710        720
ggtggaattc ttggagtaac ttcgaaaagt gataaaagac ataaaatgat gttttcggtg
       730        740        750        760        770        780
ttaaaagacg aattgatgca gaatattgaa aaacggaaga caaaaggaaa agattggaaa
       790        800        810        820        830        840
gatatgggaa agaaaatgca gacgcattgc ccacaagctg accgaattcc tcttccacca
       850        860        870        880        890        900
atcagcgaac atcttcgaga ggaacgacga aattggcttc gagacgtcgg aaaaatggcc
       910        920        930        940        950        960
atcatttcag ctgaatcacc cgtttccatt tgtatgtaca caacagtaaa tgcaccaatt
       970        980        990       1000       1010       1020
ggagtggctt catgtgattt tacggatgat tcaagtctta ttgcaatggg tttatctgat
      1030       1040       1050       1060       1070       1080
tcttcaattg ttatgaatgc aatggatccg atgaataaga tgaagaagct tcgtgatatg
      1090       1100       1110       1120       1130       1140
gaatttcttg ataaaatcga tattgaaact gcggataacg tgcaatcaca aatgtttgat
      1150       1160       1170       1180       1190       1200
ttacaaggat caacgacaag tgtgaggtat acaggccacg gtggtcccgt gttttctgtc
      1210       1220       1230       1240       1250       1260
aatttttcac cggatcgacg acttcttata tcatctgccg gagatcgaac agttcgactt
      1270       1280       1290       1300       1310       1320
tggagtatgg agactcagag gaatgctgtt atttatagaa caccagcagt agtttggcag
      1330       1340       1350       1360       1370       1380
gctcaattct gtagtcgtgg atactatttc gctacagcaa gtgccgataa aacagctgca
      1390       1400       1410       1420       1430       1440
atgtggtcga cagatcgaat gcatccactt agaatattcg ctgatccata tggagacgtt
      1450       1460       1470       1480       1490       1500
ggatgtattg attatcatcc aaattgtaat tatattgctg gaggatcaga tgatagatat
      1510       1520       1530       1540       1550       1560
gttcgagtat gggatgtttg ttctggtact cgagttcgca tttttagtgg tcataaagct
      1570       1580       1590       1600       1610       1620
tcgattatcg ctgtcaagtt ctccccatgt ggtcggtata tcgtctcgtt agatgctatt
      1630       1640       1650       1660       1670       1680
ggaaatctga tgatttggga tttggcatac cagagattag ttgcagctga aattacggaa
      1690       1700       1710       1720       1730       1740
caagctggaa cgaagggttc aattacattc tctcgtgatg gtggtgtatt tgcggtatcc
      1750       1760       1770       1780       1790       1800
catggaaatt caagtattca attatattca cttgatactc ttattggaac agttctcgcc
      1810       1820       1830       1840       1850       1860
gctggacaaa atgattccta cattgagcca aaagtgaatc tggacggttt caatatagga
      1870       1880       1890       1900       1910       1920
tcatatgcaa caaaagaaac tgcagtaatc ggactccatt tcactcgtcg aaatcttctt
      1930       1940
cttggatttg gttgcttcgg gcaataa   

Last modification date: Oct. 2, 2011