Schizo-saccharomyces pombe Lindner (fission yeast) [SPO]

FULL NAME: Transcription initiation factor TFIID subunit 5


DESCRIPTION:
TAFs are components of the transcription factor IID (TFIID) complex that are essential for mediating regulation of RNA polymerase transcription. Regulates the genes involved in ubiquitin-dependent proteolysis during the progression of M-phase of mitosis.

STRUCTURE SIMILARITY:
Belongs to the WD repeat TAF5 family.
Contains 6 WD repeats.
Contains 1 LisH domain.


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MSATNGPQPQ DLNRIVLDYL AKKGYSRTEA MLRLEASGSG VSVEEKLKSI EETPDAYTHT
        70         80         90        100        110        120
YTILRDWVDS SLELYKAELH RILFPIFVHS YLNLLSQDHY EAAKQFYELF KDDHTDLHDF
       130        140        150        160        170        180
DVKNLKSLSL PSHVAEDRTA QQYRQNKYQL HFSRITFDLL LHFLFENVSN GGSIIIKLIN
       190        200        210        220        230        240
QHIDIHIVPG RPTVLENAKV INEQEGITGQ SFERGDAQLQ PVKLQQMPMD KEMEKIVEMD
       250        260        270        280        290        300
LEEEDMMHQN DPNNQSPKLL KEFRKLHEPN AEDAPSRDYI PLPPHKGVDI LSEVEAVKDW
       310        320        330        340        350        360
SKRLHLGPRA SLPSVCMYTF HHTNNNMNCA EFSPDSTMIA CGFQESYIRL WSIKADKKSL
       370        380        390        400        410        420
PKSTSVEDSD GSVRLLSHSG PVYGTTFSPD NKYLLSCSED ASARLWSVDT KTALVAYKGH
       430        440        450        460        470        480
TGPVWDVAFG PFGHYFATAS HDQTAQLWSC DHIYPLRVFA GHLSDVDCVT FHPNSAYVLT
       490        500        510        520        530        540
GSSDKTCRLW DVHRGHSVRV FNGHTQPVTA VAIAPDGHTM ASADSEGLIH LWDIGTGRRI
       550        560        570        580        590        600
KTMRGHRGNI YSLSFSREST VLVSGGSDCT VRAWDVFKTN YNNPVSSSLT GSVVTPFSAK
       610        620        630        640
TSTFNEVNWS TSPDQMVALY TKQTPIFNVS FTRRNLCLAI SVS 

Encoded by taf5 gene


Nucleic acid sequence

        10         20         30         40         50         60
atgtctgcca ctaatgggcc gcaaccgcag gatctgaaca gaattgttct ggattacctt
        70         80         90        100        110        120
gcgaagaagg gatactcaag gaccgaggcg atgcttcgtt tggaagcatc gggttctggc
       130        140        150        160        170        180
gtgtcagtag aggagaagtt aaaaagcatt gaggaaactc cagatgcata cacacacacg
       190        200        210        220        230        240
tatacgatct tacgagactg ggtggatagt tcgttagaat tgtacaaagc tgaacttcac
       250        260        270        280        290        300
aggatattat ttcctatatt tgttcactca tatcttaatc tcttgtctca agatcattat
       310        320        330        340        350        360
gaagctgcaa agcaatttta cgaactcttc aaagacgatc atactgatct tcatgacttt
       370        380        390        400        410        420
gatgtaaaaa acttaaaatc gctgagtctt ccaagccatg tcgcagaaga ccgcactgct
       430        440        450        460        470        480
caacaatacc ggcaaaataa atatcaactc catttttcta ggataacatt tgatttattg
       490        500        510        520        530        540
cttcatttct tatttgaaaa cgtttcaaac ggtgggtcaa ttatcattaa attaatcaat
       550        560        570        580        590        600
cagcatatag atatccatat cgttcccgga cgtcccaccg tcttggaaaa tgctaaagtt
       610        620        630        640        650        660
atcaatgaac aagaaggtat taccggccaa tcctttgaac gaggagatgc tcaacttcaa
       670        680        690        700        710        720
cctgtaaagc tgcaacaaat gccaatggac aaagaaatgg aaaaaattgt agagatggac
       730        740        750        760        770        780
ttagaagaag aggatatgat gcaccaaaac gatccaaata accaatctcc aaaactatta
       790        800        810        820        830        840
aaagaattta gaaagctgca tgaacctaat gctgaagatg ctccgtctag agattatatc
       850        860        870        880        890        900
cctcttcctc ctcataaagg tgttgatatt ctttcagaag ttgaggctgt gaaagattgg
       910        920        930        940        950        960
agtaaaagat tacatcttgg acctagagcc tcccttccta gtgtttgtat gtacacattc
       970        980        990       1000       1010       1020
catcacacca ataacaacat gaactgtgct gaattttctc ctgactccac aatgatcgcc
      1030       1040       1050       1060       1070       1080
tgtggttttc aagaaagtta tatacggcta tggtcaataa aggctgacaa aaaatcatta
      1090       1100       1110       1120       1130       1140
cctaagtcaa cttctgtaga ggattcagat ggctcagtac gtttactgag tcattctggt
      1150       1160       1170       1180       1190       1200
cctgtttacg gcaccacatt ttctcccgat aataaatatt tactatcttg ttccgaagat
      1210       1220       1230       1240       1250       1260
gctagcgccc ggctgtggtc tgttgacaca aaaactgctt tggtagctta caagggacat
      1270       1280       1290       1300       1310       1320
actggcccgg tttgggatgt tgcctttggt ccgtttggtc attacttcgc tactgcttct
      1330       1340       1350       1360       1370       1380
catgaccaga ctgcacaact ttggagctgt gatcatatat acccacttag agtttttgct
      1390       1400       1410       1420       1430       1440
gggcatttaa gtgatgtaga ctgcgttacc tttcatccaa actccgctta tgtgctaact
      1450       1460       1470       1480       1490       1500
ggatcaagcg ataaaacatg caggctttgg gatgtacata gaggacattc tgttcgtgtt
      1510       1520       1530       1540       1550       1560
tttaatggac atacccaacc ggtaactgct gttgcgattg ccccagatgg tcatactatg
      1570       1580       1590       1600       1610       1620
gcaagtgctg acagtgaagg tctaattcac ctttgggaca taggaacagg aaggcgtata
      1630       1640       1650       1660       1670       1680
aagacaatgc gaggtcacag aggcaacata tactctttgt cattttctcg cgaatccacg
      1690       1700       1710       1720       1730       1740
gtcctcgtta gcggagggtc agattgtact gtgagagctt gggacgtttt caaaactaat
      1750       1760       1770       1780       1790       1800
tacaacaatc ctgtttcttc ttctctaacg ggaagtgttg ttacaccttt ctctgctaaa
      1810       1820       1830       1840       1850       1860
acatccacat ttaatgaagt caattggtct acaagtccgg atcaaatggt agctctttat
      1870       1880       1890       1900       1910       1920
acgaagcaaa cccctatatt taatgtctcc tttacgcgtc gtaacctttg cttagcaata
      1930
agcgttagtt ag    

Last modification date: Oct. 2, 2011