Schizo-saccharomyces pombe Lindner (fission yeast) [SPO]

FULL NAME: Transcription initiation factor TFIID subunit taf73


DESCRIPTION:
TAFs are components of the transcription factor IID (TFIID) complex that are essential for mediating regulation of RNA polymerase transcription. Regulates the genes involved in ubiquitin-dependent proteolysis during the progression of M-phase of mitosis.

STRUCTURE SIMILARITY:
Belongs to the WD repeat TAF5 family.
Contains 6 WD repeats.
Contains 1 LisH domain.


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MAQSSYSSGN STSDLNKIVL DYLFKKGYSR TEAMLRLEIS SVGAIPEEQQ DWHIGASETY
        70         80         90        100        110        120
VQVYILLRDW IDGTLDLYKP KLQKVLYPIF VHSYLDLLQK NDPEMAIYFF ESFRIEHEVL
       130        140        150        160        170        180
HGYDIRALAQ LKIASDVEEI EIAQLYRKNK YRINFTRSTF DLLVQFLFEN EVNGSGIIIR
       190        200        210        220        230        240
LLNQYIDIKI TMPQVEGKED PNVQAVYEMD EAKNEQTIIS EQEGIPGHSE QLLDYNKQSI
       250        260        270        280        290        300
QLGLRPLSEE VVTTLKNLLE VKDKDVEGRN EALNKILHPA KNLVELLTEK ENLINESTLE
       310        320        330        340        350        360
SPSDPPLPPT KMKDIDYFVS LLESEQNSLI LGKNATDPSV FMYTMHNTLS AVNCAAFSDD
       370        380        390        400        410        420
ASMFALGCAD SSIHLYSSTN NGPQPLVGSQ NEPLQKSSLI GHTRPVFGVS ISPQKEFILS
       430        440        450        460        470        480
CSEDGFTRLW SKDTKSTIVK YAGHNAPIWD VQFSPFGYYF ATASHDQTAR LWDVEHAAPL
       490        500        510        520        530        540
RVFVGHQNDV DCVSFHPNAA YLATGSSDHT TRMWDVRTGG TVRVFNAHHS PVSALCMSAD
       550        560        570        580        590        600
GLSLASADES GIIKVWDLRS SNQHVSFVKH SSIVYSLSFS YDNKILVSGG ADTDVNFWDL
       610        620        630        640
TYRNNLSDGE QSPLLFNFKT KNTIIQNLSF TRRNYCLALS SS 

Encoded by taf73 gene


Nucleic acid sequence

        10         20         30         40         50         60
atggctcaat cttcctactc ttctggtaat tcaacttcag atttaaacaa gattgttttg
        70         80         90        100        110        120
gactatctgt ttaaaaaggg ttattccagg actgaagcta tgcttcggtt ggaaatatcc
       130        140        150        160        170        180
agtgttggcg caattcctga agaacagcaa gactggcaca tcggtgcttc tgaaacttat
       190        200        210        220        230        240
gtacaagttt atattttatt aagagattgg attgatggta cattagattt gtataagcca
       250        260        270        280        290        300
aaactacaaa aagtccttta tccaattttt gtacactctt acttagactt actgcaaaaa
       310        320        330        340        350        360
aatgatcccg aaatggcaat atacttcttt gaatcatttc gtatagagca tgaagtgttg
       370        380        390        400        410        420
catggctatg acattcgagc attagctcag ttgaagattg catcagacgt tgaggagata
       430        440        450        460        470        480
gaaatagctc agctttatcg caaaaataaa taccggatta atttcacgag gtctacattt
       490        500        510        520        530        540
gatttactag tacagttttt gttcgaaaac gaagtcaatg gaagtggaat aataattcgc
       550        560        570        580        590        600
ttattgaatc agtacattga tataaaaatt actatgcctc aagtcgaggg caaggaggac
       610        620        630        640        650        660
cctaatgtgc aagcggtcta tgaaatggac gaagctaaaa atgaacagac aataattagt
       670        680        690        700        710        720
gagcaagaag gaattcctgg ccattccgaa cagcttcttg attacaacaa gcaaagcata
       730        740        750        760        770        780
caacttggat tacgtccctt gtcagaagaa gttgtcacaa ctttaaaaaa cttgttagaa
       790        800        810        820        830        840
gtaaaagata aagacgtgga gggaagaaat gaagctctga ataaaatatt gcatcctgca
       850        860        870        880        890        900
aagaaccttg tcgaattgct gactgaaaaa gaaaatctaa tcaacgaatc aactctagaa
       910        920        930        940        950        960
tcaccatctg atcccccatt acctccaacc aaaatgaagg acatagacta ttttgtttct
       970        980        990       1000       1010       1020
ttactggaaa gcgaacagaa ttctttaata ctcggaaaaa atgctacgga tcctagtgtt
      1030       1040       1050       1060       1070       1080
ttcatgtata ccatgcacaa tacactttcc gctgtaaatt gtgctgcatt ctctgatgac
      1090       1100       1110       1120       1130       1140
gcctctatgt tcgctctggg ttgcgcagac tcttcaattc atttgtacag ttctactaac
      1150       1160       1170       1180       1190       1200
aatggtccgc aaccattagt gggaagtcaa aatgagcctt tacaaaagtc ctctttaatt
      1210       1220       1230       1240       1250       1260
ggacatacga gaccagtttt tggagtgagc atctctcctc aaaaagagtt tatactgtca
      1270       1280       1290       1300       1310       1320
tgctctgagg atggctttac tcgtttgtgg tccaaggata ctaagtccac tattgtcaaa
      1330       1340       1350       1360       1370       1380
tatgctggtc ataatgcgcc gatttgggac gttcagtttt cccctttcgg ctattatttt
      1390       1400       1410       1420       1430       1440
gcaacagcct cgcacgacca aacagcacgt ctatgggatg ttgagcatgc agcacctttg
      1450       1460       1470       1480       1490       1500
agagtatttg ttggacatca aaatgatgtg gattgtgttt catttcatcc gaatgcagct
      1510       1520       1530       1540       1550       1560
tatcttgcta caggatctag tgatcataca actagaatgt gggacgttcg cactggtgga
      1570       1580       1590       1600       1610       1620
acagttcgcg tgtttaatgc ccatcattct cctgtttctg cattgtgtat gtctgctgat
      1630       1640       1650       1660       1670       1680
ggcttatcgt tggcatctgc tgatgaatcg ggcataataa aagtgtggga tctcagaagt
      1690       1700       1710       1720       1730       1740
agtaatcagc acgtttcatt cgttaaacac tctagtatcg tttattctct ttctttttca
      1750       1760       1770       1780       1790       1800
tatgataaca aaattctggt ttccggaggt gcagatactg atgttaactt ttgggatttg
      1810       1820       1830       1840       1850       1860
acataccgga ataacttatc ggacggcgaa cagtccccgc ttttattcaa ttttaaaacc
      1870       1880       1890       1900       1910       1920
aaaaatacta ttatacaaaa cttaagtttt actcgaagaa actattgtct agcattaagc

tcttcctaa     

Last modification date: Oct. 2, 2011