Arabidopsis thaliana (L.) Heynh. (mouse-ear cress) [ATH]


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MDQPRQSSTA SQPPETPPQP SDSKPSTLTQ IQPTPSTNPS PSSVVSSIPS SPAPQSPSLN
        70         80         90        100        110        120
PNPNPPQYTR PVTSPATQQQ QHLSQPLVRP PPQAYSRPWQ QHSSYTHFSS ASSPLLSSSS
       130        140        150        160        170        180
APASSSSSLP ISGQQRGGMA IGVPASPIPS PSPTPSQHSP SAFPGSFGQQ YGGLGRGTVG
       190        200        210        220        230        240
MSEATSNTSS PQVRMMQGTQ GIGMMGTLGS GSQIRPSGMT QHQQRPTQSS LRPASSTSTQ
       250        260        270        280        290        300
SPVAQNFQGH SLMRPSPISS PNVQSTGASQ QSLQAINQPW LSSTPQGKPP LPPPSYRPQV
       310        320        330        340        350        360
NSPSMQQRPH IPQQHISTSA ATPQPQQQQS QQQHQPQEQL QQLRSPQQPL AHPHQPTRVQ
       370        380        390        400        410        420
GLVNQKVTSP VMPSQPPVAQ PGNHAKTVSA ETEPSDDRIL GKRSIHELLQ QIDPSEKLDP
       430        440        450        460        470        480
EVEDILSDIA EDFVESITTF GCSLAKHRKS DILEAKDILL HVERNWNIRP PGFSSDEFKT
       490        500        510        520        530
FRKPLTTDIH KERLAAIKKS VTATEAANAR NQFGHGTANA RGGQAKTPSN PMGSTTFNH

Encoded by TAF12 gene


OTHER NAME(S):
TAFII58
TATA-ASSOCIATED FACTOR II 58
TBP-associated factor 12


DESCRIPTION:
Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.


Nucleic acid sequence

        10         20         30         40         50         60
atggatcagc cacggcaaag ctcgacggcg tctcagccac cggaaacacc tcctcagccg
        70         80         90        100        110        120
tcggattcga aaccatcgac tttaacacag attcaaccaa cgccttccac aaatccgagt
       130        140        150        160        170        180
ccctcctccg ttgtttcctc tattccctct tccccagctc cacaatcacc atcgctcaat
       190        200        210        220        230        240
ccaaacccta atcctcctca atacacgcgt ccggtgacat ctccggcgac gcaacagcag
       250        260        270        280        290        300
caacatctct cccagccttt agtacggccg cctccgcagg cgtactctag accatggcaa
       310        320        330        340        350        360
caacactcct cttacactca cttctcctcc gcttcgtcgc cattgttatc ttcctcatca
       370        380        390        400        410        420
gcgccagcct cttcgtcttc gtctttacct attagtgggc aacaaagagg tggtatggcg
       430        440        450        460        470        480
attggcgttc cggcttcccc aattccgagt ccttctccta caccttctca acattcgcct
       490        500        510        520        530        540
tctgcttttc ccggctcttt tgggcaacaa tacggcggat taggtcgtgg aactgttgga
       550        560        570        580        590        600
atgtcagaag ctacgtccaa tacaagttcc cctcaggtta gaatgatgca aggaactcag
       610        620        630        640        650        660
ggaattggga tgatgggaac acttggctca ggttcccaaa taaggccgag tgggatgact
       670        680        690        700        710        720
cagcaccaac agagaccaac tcaatcgtct ctaaggccag cttcctccac aagtacccaa
       730        740        750        760        770        780
tctcctgttg ctcaaaactt tcaaggacat agccttatga gaccttcacc tattagctct
       790        800        810        820        830        840
cctaatgtcc aatctactgg tgcatcacaa caaagcttgc aagctatcaa tcaaccttgg
       850        860        870        880        890        900
ttatcatcta ctccccaagg gaagccgcct ttgccacctc cttcgtatag accacaagta
       910        920        930        940        950        960
aattctccct ctatgcaaca aagacctcat attcctcagc aacatatttc tacgtcagca
       970        980        990       1000       1010       1020
gcaactccac agcctcagca acaacaatct caacaacaac atcagcctca agagcaactt
      1030       1040       1050       1060       1070       1080
caacaattga gatctccgca gcagccttta gctcacccac atcaaccaac ccgggtccaa
      1090       1100       1110       1120       1130       1140
ggtttggtaa atcagaaagt tacttctccg gtaatgccga gccagcctcc tgtggctcaa
      1150       1160       1170       1180       1190       1200
ccaggaaacc atgctaaaac agtttctgca gagaccgagc cgtctgatga tcgtatcctg
      1210       1220       1230       1240       1250       1260
gggaaacgaa gcatccatga gctacttcaa cagattgacc cgtcagagaa attggatcca
      1270       1280       1290       1300       1310       1320
gaggttgaag acatcctttc tgatattgct gaagattttg tggagtcaat cacaactttt
      1330       1340       1350       1360       1370       1380
ggctgttctt tagccaagca tagaaagtca gatattctag aggctaagga catcttgctc
      1390       1400       1410       1420       1430       1440
catgttgaaa gaaactggaa tattaggcct cctggtttta gcagtgatga gttcaagaca
      1450       1460       1470       1480       1490       1500
tttcggaagc cattgacaac agatattcac aaagagcgac ttgcggctat aaagaagtcg
      1510       1520       1530       1540       1550       1560
gtcacggcaa cagaagcagc aaacgccagg aatcagtttg ggcatgggac tgctaatgca
      1570       1580       1590       1600       1610       1620
agaggcggtc aggcaaagac accttctaat cccatgggct ctacaacttt caatcactga

Last modification date: Oct. 2, 2011