Caenorhabditis elegans Maupas (nematode) [CEL]

FULL NAME: Transcription initiation factor IIB


DESCRIPTION:
General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II (By similarity).

STRUCTURE SIMILARITY:
Contains 1 TFIIB-type zinc finger.
Belongs to the TFIIB family.


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MSAPVQCPIH PDVHLIEDHR AGDLVCPACG LVVGDRLVDV GTEWRSFSNE RSGNDPSRVG
        70         80         90        100        110        120
APENPLLSGG DLSTTIAVGF GGSDSDNSLA NAQRKSMNNT DRQMTAAMSL IREMSERIHL
       130        140        150        160        170        180
PRNIQDSASR IFKDVLESKA LRGKNNEAQA AACLYIACRK DGVPRTFKEI CAVSRVSKKE
       190        200        210        220        230        240
IGRCFKIIVR SLETNLEQIT SADFMSRFCG NLSLPNSIQA AATRIAKCAV DMDLVAGRTP
       250        260        270        280        290        300
ISIAAAAIYM ASQASAEKRS AKEIGDVAGA AEITVRQTYK LLYPKALELF PKDFRFVTPI

DALPNS     

Encoded by ttb-1 gene

FULL NAME: TFII(two)B (general transcription factor)


Nucleic acid sequence

        10         20         30         40         50         60
atgtcggctc cagtccagtg tccgatccat ccagacgtgc atttgatcga agatcaccgt
        70         80         90        100        110        120
gccggggatc tggtctgtcc ggcgtgcggc ttggtcgtcg gtgatcgtct ggtcgacgtc
       130        140        150        160        170        180
ggaaccgaat ggcgttcatt ttccaacgaa cgtagtggaa atgacccatc tcgtgtcgga
       190        200        210        220        230        240
gcaccggaaa atccgctgct cagcggcgga gatttgagca caactatcgc cgtgggcttt
       250        260        270        280        290        300
ggcggctccg acagtgataa tagtttggcg aatgctcaaa gaaagtcaat gaacaatacg
       310        320        330        340        350        360
gatcgtcaaa tgaccgccgc gatgagcctt attagggaaa tgagcgagag aattcacttg
       370        380        390        400        410        420
ccaagaaata ttcaggacag cgcctcccgt atattcaaag atgtgctcga aagtaaagct
       430        440        450        460        470        480
ctccgcggaa aaaacaacga ggcacaggcg gccgcgtgcc tatacattgc gtgccgaaaa
       490        500        510        520        530        540
gacggcgttc cccgtacttt caaggaaatt tgtgcggttt ctcgagtctc gaaaaaggaa
       550        560        570        580        590        600
attggacgat gtttcaagat tatcgtacgg agtttggaga cgaatctcga gcaaattaca
       610        620        630        640        650        660
tctgcagatt ttatgtctcg gttctgtgga aatctatcgc tacccaactc gattcaggcg
       670        680        690        700        710        720
gcagccacga gaattgcaaa atgcgcggtg gatatggatt tggtcgctgg ccgtaccccc
       730        740        750        760        770        780
atctcaattg ccgccgccgc aatctacatg gcatcacagg cgtctgcaga aaaacggtct
       790        800        810        820        830        840
gccaaagaaa ttggtgacgt ggcaggagcc gccgagatca ccgtgcgtca gacttacaag
       850        860        870        880        890        900
ctgctctacc cgaaggcact cgagcttttc ccaaaagatt tccgctttgt cactccaatc
       910        920
gacgctcttc caaactcata a   

Last modification date: Oct. 2, 2011