Schizo-saccharomyces pombe Lindner (fission yeast) [SPO]

FULL NAME: Transcription initiation factor IIB


DESCRIPTION:
General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II (By similarity).

STRUCTURE SIMILARITY:
Contains 1 TFIIB-type zinc finger.
Belongs to the TFIIB family.


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MNAPSFTGLP TSMLSVKMIC SECREDPPNL VEEFSSGDTV CGSCGLVLGD RIIDTRSEWR
        70         80         90        100        110        120
TFSNSDEASG DPSRVGKVAN PLLNGSQLDT TISSYDGAGA MLAKAQGRSV QVRGEKNLLT
       130        140        150        160        170        180
AYKEIGAMCD AISLPKVIAD TAKQLYKRVD DHKALKGKSS QSIIAACIYI ACRQGKVPRT
       190        200        210        220        230        240
FMEICTLTNV PKKEIGRVYK TLQRMLTEGG ALHNSVDALK GHEYIQSSST SAEDLMVRFC
       250        260        270        280        290        300
NRLMLPMSVQ SAAAELARRA GLQGTLAGRS PISIAASGIY MISALMGYPK TPKEISEVTG
       310        320        330        340
VSDSTIRIAY KLLHAERKEL IDPKWIANKA GNMDAMLPKP  

Encoded by gid:2542339 gene


Nucleic acid sequence

        10         20         30         40         50         60
atgaacgcac catcatttac aggtttgccg acgagcatgc tttcggtcaa aatgatatgc
        70         80         90        100        110        120
tctgaatgtc gggaagatcc tcctaatcta gttgaggaat tttcgagtgg tgataccgtt
       130        140        150        160        170        180
tgtggaagct gtggattggt tttgggtgat cgaattatcg atacgagaag tgaatggcgt
       190        200        210        220        230        240
acgttctcca actctgatga agctagtgga gatcccagtc gtgtaggtaa agtggcgaat
       250        260        270        280        290        300
ccactgttga atggttctca attagacacg acaatttctt cgtatgacgg tgccggagcc
       310        320        330        340        350        360
atgttggcaa aggctcaagg ccgttccgtt caagttcgtg gtgaaaagaa tcttttaacc
       370        380        390        400        410        420
gcatataagg agataggcgc aatgtgcgat gcaattagct tgccaaaggt aatcgctgac
       430        440        450        460        470        480
accgcgaaac agttgtataa gcgtgttgat gatcacaagg ctttgaaggg taagtcatct
       490        500        510        520        530        540
cagtccatca ttgctgcttg catttacatt gcttgtcgtc aaggaaaggt tccccgaact
       550        560        570        580        590        600
tttatggaga tatgcacctt gaccaatgtc ccgaaaaaag aaataggtcg tgtctacaag
       610        620        630        640        650        660
actcttcaac ggatgctcac tgaaggtggc gctctgcata attccgtgga tgccttaaag
       670        680        690        700        710        720
ggccacgagt acattcaaag cagttctaca tcggctgaag atctcatggt tcgcttttgt
       730        740        750        760        770        780
aatcggctta tgcttcctat gtcggtgcaa tcagccgctg ctgaactggc tcgtagagct
       790        800        810        820        830        840
gggttgcaag gtacattggc tggtcgttca cctatttcta ttgctgcaag cggaatatat
       850        860        870        880        890        900
atgatttcgg ctctgatggg gtatcctaaa actcctaaag agatatcaga agttactggt
       910        920        930        940        950        960
gtaagtgatt ctacaatccg tattgcttat aagcttttgc atgcggaacg aaaagagctg
       970        980        990       1000       1010       1020
attgatccta aatggattgc taataaagct ggtaatatgg atgctatgtt accaaagcct

tag     

Last modification date: Oct. 2, 2011