Schizo-saccharomyces pombe Lindner (fission yeast) [SPO]

FULL NAME: Transcription initiation factor IIA large subunit


DESCRIPTION:
TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with tbp mediates transcriptional activity (By similarity).

STRUCTURE SIMILARITY:
Belongs to the TFIIA subunit 1 family.


RELATED PATHWAY(S):
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MSNSIVGEVY HHVILDVIAN SRSDFEENGV DDATLRELQN LWQSKLVATD VATFPWAQAP
        70         80         90        100        110        120
VGTFPIGQLF DPVSGLRTDS LDVTAPAVAN SPILNNIAAI RAVQQMDTFA QQHGNSNYYS
       130        140        150        160        170        180
PPTPSLPQSA TNISFDSSAI PNVQSNPNNT APFPSYSSNS LQLPTNQTAD SPIINDHSTA
       190        200        210        220        230        240
NVTSTGQEHA PDSSSTNSFG GLLLPNQNSP KKSELGETES SNTTPANSRN DVPQTDGAIH
       250        260        270        280        290        300
DLDDAGSPSN FESNRFAIAQ KADAEIYEVL KKNRILQIDG TIEDNEDEKK PPVDTPSDEA
       310        320        330        340        350        360
INSDLDDPDS DEAPETEEGS DIGQAIVLCL YDKVNHHKNK WKCVFRDGVV GVNGKDYLFF

KANGEFEWI     

Encoded by gid:2540632 gene


Nucleic acid sequence

        10         20         30         40         50         60
atgtccaatt cgatcgtcgg tgaggtctat caccacgtga tattagacgt gattgctaat
        70         80         90        100        110        120
tcacggagcg attttgaaga aaatggtgtt gatgatgcaa ctttacgaga attacaaaat
       130        140        150        160        170        180
ttatggcaaa gcaagttagt tgctaccgat gttgcaactt ttccttgggc acaagctcct
       190        200        210        220        230        240
gttggcacat ttcccattgg tcaattgttt gatccagtta gcggcttgag gacagattca
       250        260        270        280        290        300
ttagatgtta ctgctccagc tgttgcaaac tctcccatac ttaataatat agccgctatt
       310        320        330        340        350        360
cgtgctgttc agcagatgga tacatttgcg cagcaacatg gtaattcaaa ttattattct
       370        380        390        400        410        420
ccacctactc cctctctccc ccagtcagca acaaatattt cgtttgacag ctctgcaata
       430        440        450        460        470        480
cctaacgtac agtccaaccc taataatact gcccccttcc cttcttacag ctctaactca
       490        500        510        520        530        540
ttgcaactgc ccactaatca aactgctgac tcaccgatta tcaacgacca ttcgactgca
       550        560        570        580        590        600
aatgtaactt ctacgggcca agaacatgct cccgactctt catctactaa ctcatttggc
       610        620        630        640        650        660
ggattgttac ttcccaatca aaactctccg aaaaagtctg aattaggaga gacagagtct
       670        680        690        700        710        720
tctaatacca cccctgctaa ttctcgtaat gacgtgcctc aaaccgatgg tgctattcat
       730        740        750        760        770        780
gatctagatg atgctgggag cccttctaat tttgaaagta atagatttgc tattgcacag
       790        800        810        820        830        840
aaagctgatg ctgaaattta tgaagttttg aaaaagaatc gcattttgca aattgacggc
       850        860        870        880        890        900
actatagaag ataacgaaga tgaaaaaaag ccacctgttg atacgccttc tgacgaagca
       910        920        930        940        950        960
attaactcag atttagacga tcctgattca gatgaggctc ccgaaactga agaaggttct
       970        980        990       1000       1010       1020
gatattggac aggctatcgt tctttgtctt tatgacaaag tgaaccacca caaaaataaa
      1030       1040       1050       1060       1070       1080
tggaaatgtg tgttcagaga tggcgtagtt ggcgttaatg gaaaagatta cttatttttc
      1090       1100       1110
aaggcgaatg gtgagtttga atggatttaa   

Last modification date: Oct. 2, 2011