Schizo-saccharomyces pombe Lindner (fission yeast) [SPO]

FULL NAME: RNA polymerase II transcription factor B subunit 4


DESCRIPTION:
Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA. Has a role in the initiation of transcription (By similarity).

STRUCTURE SIMILARITY:
Belongs to the TFB4 family.


RELATED PATHWAY(S):
nucleotide excision repair (NER)
transcription factors


Amino acids sequence

        10         20         30         40         50         60
MDEFQTLKQN ASWDISEDAN DTPSLLVVIL DANPASWYSL SKKVPVSKVL ADITVFLNAH
        70         80         90        100        110        120
LAFHHDNRVA VLASHSDKVE YLYPSIAPEQ KVAEVDPTKE ANTYRKFREV DDLVLSGMKR
       130        140        150        160        170        180
LMSSTDKVSR KTMISGALSR ALAYINQVQN KNTLRSRILI FSLTGDVALQ YIPTMNCIFC
       190        200        210        220        230        240
AQKKNIPINV CNIEGGTLFL EQAADATGGI YLKVDNPKGL LQYLMMSLFP DQNLRKHLNT
       250        260        270        280        290
PNQANVDFRA TCFCHKKVLD IGFVCSVCLS IFCEPRVHCS TCHTKFTVEP MSKKLHT

Encoded by tfb4 gene


Nucleic acid sequence

        10         20         30         40         50         60
atggatgaat ttcaaacttt gaaacaaaat gcctcgtggg atatatctga agacgcaaat
        70         80         90        100        110        120
gatacaccca gtttgcttgt agttatatta gacgcaaatc ctgcctcatg gtactccctt
       130        140        150        160        170        180
tccaaaaaag tgcctgtttc caaggtactg gcagatatta cggtttttct aaacgcacac
       190        200        210        220        230        240
ttagcttttc atcatgataa tagagttgct gtgttagctt cacactcgga caaggttgaa
       250        260        270        280        290        300
tacctatacc cttcgattgc acctgagcaa aaagtcgcag aagtagatcc taccaaggag
       310        320        330        340        350        360
gcaaatacgt atcgaaagtt tcgtgaggta gacgacttag ttttatctgg gatgaagcga
       370        380        390        400        410        420
ctcatgagtt cgactgataa agtttcaaga aaaacgatga tttccggagc actatctaga
       430        440        450        460        470        480
gcccttgcat atatcaatca agttcaaaat aaaaatactc ttcgttctcg aattctaatt
       490        500        510        520        530        540
ttctcattaa ctggtgatgt tgctcttcag tatattccta ctatgaattg tatattttgt
       550        560        570        580        590        600
gctcaaaaga aaaatattcc aattaacgtt tgcaacattg agggaggcac cctgttttta
       610        620        630        640        650        660
gaacaagcag cagatgccac aggagggatt tacttaaaag ttgacaaccc caaaggctta
       670        680        690        700        710        720
ctacaatatc tcatgatgtc gctttttccg gatcaaaatc ttcgaaaaca cttaaatacc
       730        740        750        760        770        780
ccaaaccaag cgaatgttga ttttcgagct acatgttttt gccacaaaaa ggttttggat
       790        800        810        820        830        840
attggctttg tttgctcagt ttgtctatca atattttgtg aaccacgggt gcattgttct
       850        860        870        880        890
acttgtcata ccaaattcac ggtagaacct atgtcaaaaa aattgcacac ttga

Last modification date: Oct. 2, 2011