Arabidopsis thaliana (L.) Heynh. (mouse-ear cress) [ATH]

FULL NAME: DNA ligase


STRUCTURE SIMILARITY:
Belongs to the ATP-dependent DNA ligase family.


CATALYTIC ACTIVITY:
ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).


RELATED PATHWAY(S):
DNA replication
base excision repair (BER)
nucleotide excision repair (NER)
mismatch repair (MMR)


Amino acids sequence

        10         20         30         40         50         60
MSNASAKKKR KLEETVDTPP TRVDDKTLVL ISDSKKPKSD RVTKLKSKIG LLKKKPTESG
        70         80         90        100        110        120
RIVITHILCN MLRTVIATTP DDLLPTVYLA ANEIAPAHEG IKLGMGKGSY IIKAISEAFG
       130        140        150        160        170        180
RTESHVEQQY TQLGDLGLVA NGSRSSQTMI FMPKPLTVVK VADTLRLIAK ESGKGSKDKK
       190        200        210        220        230        240
KDLMKALLVA TTDCEPLYLT RLLQDNLRLG FSRQTVLAAL GQAAVYNEEH SKPPPNIKNP
       250        260        270        280        290        300
LDEAATIVKE VFSMLPVYDI IVGALLTSGV WNLPKTCNLT LGVPVRPMLA KATTRVDLIL
       310        320        330        340        350        360
EKFKDTVFTA EYKYDGERAQ IYYMEDGTVE IFSRHAERNT GKYPDVALVL SRLKKPTVKS
       370        380        390        400        410        420
FILDCEVVTF NREKEKILPL QSTRAHKNVN VSDIKVGVCV FAFDILYLNG QLLIHENLNI
       430        440        450        460        470        480
RREKLHDSFE EDLGYFQFAT ALTSNDIGEL QEFLKASIDI GCEGLMIKSL YSNATYEPAK
       490        500        510        520        530        540
RSNNWLKLKK DYMDNIGDSV DLVPIATFHG RGKRTGFFGA YLLACYDVDK EEFQSICKIG
       550        560        570        580        590        600
TEFSDVELQD LSSSLCSKVI ATPKQYYQVD NDLNPDVWLE PTEVWEVKAA DLTVSPVYRE
       610        620        630        640        650
AIGIVDPDKG ISLRFPRLVR IRKDKNPEEA TTSDQIAEMY QAQKHNQPSN QGKVDDD

Encoded by gid:841349 gene


OTHER NAME(S):
F13F21.31
F13F21_31


Nucleic acid sequence

        10         20         30         40         50         60
atgtcgaatg cttccgccaa gaagaagaga aaactcgagg aaaccgtaga tacgccaccg
        70         80         90        100        110        120
actagggttg atgacaaaac cctagttctt atttctgatt cgaaaaaacc caaatcagat
       130        140        150        160        170        180
agggttacca aactgaagag caaaattggg ttgctgaaga agaagccaac tgaaagtggc
       190        200        210        220        230        240
aggattgtca tcactcatat tctgtgtaac atgttgagaa ccgttatcgc cactactcct
       250        260        270        280        290        300
gatgatttgc tacctactgt ttatcttgct gcaaatgaga ttgcccctgc tcatgaaggt
       310        320        330        340        350        360
attaaattgg gaatgggtaa gggttcctac attattaagg caatctctga agcttttggt
       370        380        390        400        410        420
agaactgagt cccacgttga gcagcaatat acgcaactgg gagacttggg gcttgtagca
       430        440        450        460        470        480
aatgggagcc gttcctctca gactatgatt ttcatgccca aaccattaac tgttgtcaag
       490        500        510        520        530        540
gttgctgata cacttcgcct aattgctaag gaatctggaa aaggtagtaa ggataagaag
       550        560        570        580        590        600
aaggatctaa tgaaggcact tcttgtggca actacagatt gtgaacctct ttacttaact
       610        620        630        640        650        660
cgtttacttc aggataattt gcggttaggg ttctcacgtc aaactgtttt agctgccttg
       670        680        690        700        710        720
ggacaggctg ctgtatataa cgaagagcat tctaagccgc ccccaaatat caagaatcct
       730        740        750        760        770        780
ttagatgagg ctgcaacgat tgttaaagaa gtattctcaa tgcttcctgt ctatgacatt
       790        800        810        820        830        840
attgttggtg ctcttctaac tagtggtgta tggaatcttc ctaaaacttg taacctcaca
       850        860        870        880        890        900
ctcggtgttc cagttaggcc catgcttgca aaagcaacta caagagtaga tctcatactt
       910        920        930        940        950        960
gagaaattca aggacactgt tttcacagct gaatacaaat atgatggtga acgtgcacag
       970        980        990       1000       1010       1020
atatattata tggaggatgg tacagtcgag atattcagta gacatgctga aagaaacact
      1030       1040       1050       1060       1070       1080
ggcaagtacc ctgatgttgc tcttgtgtta tcaaggttaa agaagcccac tgtgaaatct
      1090       1100       1110       1120       1130       1140
tttattctgg attgcgaggt tgtcaccttc aacagagaaa aagagaaaat tcttccactc
      1150       1160       1170       1180       1190       1200
cagagtacac gagcccataa aaatgtgaat gtcagtgata tcaaggttgg cgtatgcgtc
      1210       1220       1230       1240       1250       1260
tttgcttttg atatattata cctaaatggc caactactta tccatgagaa tctgaacatt
      1270       1280       1290       1300       1310       1320
cgccgagaga agctacacga ttcatttgag gaagatcttg ggtatttcca gtttgcaact
      1330       1340       1350       1360       1370       1380
gctctaacat ccaacgatat tggtgaatta caagagtttc ttaaagcttc tattgacata
      1390       1400       1410       1420       1430       1440
ggatgtgaag gtttaatgat aaagtcattg tactcaaatg caacctatga gcctgcaaag
      1450       1460       1470       1480       1490       1500
agatcaaata attggctaaa actgaagaag gactatatgg acaacattgg agattccgtg
      1510       1520       1530       1540       1550       1560
gatcttgtac caatagctac gttccatgga cgtgggaaac gcacaggttt ctttggtgca
      1570       1580       1590       1600       1610       1620
tatttactag cgtgctacga tgttgataag gaagaattcc agagcatttg taaaattggt
      1630       1640       1650       1660       1670       1680
actgaatttt ctgatgtgga gcttcaagat ttgtcttcca gtctttgctc taaagtgatt
      1690       1700       1710       1720       1730       1740
gctactccga aacaatacta ccaagtcgat aacgatctca atccagatgt ctggttggag
      1750       1760       1770       1780       1790       1800
cccaccgagg tgtgggaagt gaaagcagct gacttgacag ttagccctgt atatcgtgaa
      1810       1820       1830       1840       1850       1860
gctattggaa ttgtggaccc tgacaaggga atttctctac gatttcctcg tctagtccgt
      1870       1880       1890       1900       1910       1920
atacggaaag acaagaatcc agaggaagca acaacatctg accagattgc tgaaatgtat
      1930       1940       1950       1960       1970
caagctcaga aacacaatca accaagcaat caaggcaaag tggacgacga ttga

Last modification date: Dec. 5, 2011