Arabidopsis thaliana (L.) Heynh. (mouse-ear cress) [ATH]

FULL NAME: DNA Polymerase gamma 1


STRUCTURE SIMILARITY:
Belongs to the DNA polymerase type-A family.


PROTEIN TYPE(S):
3'-5' exonuclease
A-family DNA polymerase


RELATED PATHWAY(S):
DNA replication
base excision repair (BER)
nucleotide excision repair (NER)
homologous recombination (HR)


Amino acids sequence

        10         20         30         40         50         60
MGVSLRHLSP SSFWVSRRPR VSSSILSFLV PRRRILCTRK VAIIKGNAGY STATDCGGSH
        70         80         90        100        110        120
GFHHSGHQRS SSVEFSGEWK LNLGSKTARM VPPTVKQAGA VSAWREEVNN KLRGRNREYA
       130        140        150        160        170        180
NNQDDAFGNG SYILKGFVPK IDDVHSYGNG QNFDYNLKPG TDITTLGREL NGFMQTNSIR
       190        200        210        220        230        240
GSVVALPSKD IEVGETTDVT LKPLNSDTTL DNASYKKTAT ISKVEKCTNL SQVRANLKKI
       250        260        270        280        290        300
YNRVRVVDNV SSAKETVALL MNQYRNLVHA CDTEVSRIDV KTETPVDHGE MICFSIYCGS
       310        320        330        340        350        360
EADFGDGKSC IWVDVLGENG RDILAEFKPF FEDSSIKKVW HNYSFDNHII RNYGIKLSGF
       370        380        390        400        410        420
HGDTMHMARL WDSSRRISGG YSLEALTSDP KVLGGTETKE EAELFGKISM KKIFGKGKLK
       430        440        450        460        470        480
KDGSEGKLVI IPPVKELQME DREAWISYSA LDSISTLKLY ESMKKQLQAK KWFLDGKLIS
       490        500        510        520        530        540
KKNMFDFYQE YWQPFGELLA KMESEGMLVD RDYLAQIEIV AKAEQEIAVS RFRNWASKHC
       550        560        570        580        590        600
PDAKHMNVGS DTQLRQLFFG GISNSCNDED LPYEKLFKVP NVDKVIEEGK KRATKFRNIK
       610        620        630        640        650        660
LHRISDRPLP TEKFTASGWP SVSGDTLKAL AGKVSAEYDY MEGVLDTCLE ENIGDDDCIS
       670        680        690        700        710        720
LPDEVVETQH VNTSVESDTS AYGTAFDAFG GGESGKEACH AIAALCEVCS IDSLISNFIL
       730        740        750        760        770        780
PLQGSNVSGK DGRVHCSLNI NTETGRLSAR RPNLQNQPAL EKDRYKIRQA FIASPGNSLI
       790        800        810        820        830        840
VADYGQLELR ILAHLASCES MKEAFIAGGD FHSRTAMNMY PHIREAVENG EVLLEWHPQP
       850        860        870        880        890        900
GQEKPPVPLL KDAFASERRK AKMLNFSIAY GKTAIGLSRD WKVSREEAQD TVNLWYNDRQ
       910        920        930        940        950        960
EVRKWQELRK KEAIQKGYVL TLLGRARKFP EYRSRAQKNH IERAAINTPV QGSAADVAMC
       970        980        990       1000       1010       1020
AMLEISNNQR LKELGWKLLL QVHDEVILEG PSESAENAKD IVVNCMSEPF NGKNILSVDL
      1030
SVDAKCAQNW YAGK    

Encoded by POLGAMMA1 gene


OTHER NAME(S):
polymerase gamma 1


Nucleic acid sequence

        10         20         30         40         50         60
atgggggttt ctcttcgtca cttgtctcct tcctctttct gggtttcgcg tcgtcctcgt
        70         80         90        100        110        120
gtttcttctt caattctttc ttttcttgtc cctcgccgtc gaatcctttg caccaggaaa
       130        140        150        160        170        180
gtagcaatca taaagggaaa tgcgggatat tcgactgcta ctgattgtgg tggttctcat
       190        200        210        220        230        240
gggtttcatc attcaggtca tcaaaggtca tcctctgttg agtttagtgg agagtggaaa
       250        260        270        280        290        300
cttaatttgg gatctaagac ggcgagaatg gttccgccaa ctgtgaaaca agctggagct
       310        320        330        340        350        360
gtaagtgctt ggagggagga agtcaataat aagttaagag gaagaaatag agaatatgct
       370        380        390        400        410        420
aacaaccagg atgatgcttt tggtaatggc agttatattt taaaaggctt tgtccccaaa
       430        440        450        460        470        480
atagatgatg tccattctta tggaaacggc cagaactttg attacaatct gaagcctgga
       490        500        510        520        530        540
actgatatta ccacacttgg tagagaattg aatggcttta tgcaaacgaa tagtataaga
       550        560        570        580        590        600
ggatcggtcg tagcattacc aagcaaggat attgaggttg gggaaacaac agacgtgact
       610        620        630        640        650        660
ctgaaacctc ttaacagtga tacgactctt gacaatgcca gctataagaa aacagcaacc
       670        680        690        700        710        720
atttccaaag tggaaaaatg caccaaccta tcgcaagtcc gtgcaaacct caagaaaata
       730        740        750        760        770        780
tacaatagag ttcgtgttgt tgataatgtg tctagtgcaa aggaaaccgt ggctctgctc
       790        800        810        820        830        840
atgaatcaat ataggaatct tgtccatgct tgcgatacag aggtatccag gattgatgtg
       850        860        870        880        890        900
aagactgaaa cacctgtaga ccatggggag atgatttgtt tcagtatcta ttgtggatca
       910        920        930        940        950        960
gaagcagatt ttggagatgg taaatcatgt atctgggtag atgtgcttgg cgaaaatgga
       970        980        990       1000       1010       1020
agggatatcc tggctgagtt taagccattt ttcgaagact catccataaa aaaagtatgg
      1030       1040       1050       1060       1070       1080
cataactaca gctttgataa ccacatcatc agaaattatg gaatcaagct ttctggtttt
      1090       1100       1110       1120       1130       1140
catggtgata caatgcacat ggcacgattg tgggattcat ctagacggat atcgggtggt
      1150       1160       1170       1180       1190       1200
tattcgcttg aagcacttac aagtgaccca aaagttcttg ggggaactga gacaaaggag
      1210       1220       1230       1240       1250       1260
gaagcagaat tatttggtaa aatatcaatg aagaagattt tcggcaaggg aaaattgaaa
      1270       1280       1290       1300       1310       1320
aaagatggat cagaaggaaa attggtgatc attcctcctg ttaaagagct acaaatggag
      1330       1340       1350       1360       1370       1380
gatcgagaag cttggatttc gtactcagcg ttggattcaa taagcactct aaagctttat
      1390       1400       1410       1420       1430       1440
gagagcatga agaagcaact gcaagcgaag aaatggtttc ttgatggaaa actaatttca
      1450       1460       1470       1480       1490       1500
aaaaagaaca tgtttgattt ctaccaagaa tattggcaac cttttggtga acttcttgcc
      1510       1520       1530       1540       1550       1560
aaaatggaat cggaaggaat gcttgtagat agggattatt tggcgcagat tgagattgta
      1570       1580       1590       1600       1610       1620
gccaaagcag aacaagaaat tgctgtttcg aggttccgta attgggcttc aaagcattgt
      1630       1640       1650       1660       1670       1680
ccagatgcaa agcatatgaa tgttggcagt gacacgcaat tgcgacaact cttttttggt
      1690       1700       1710       1720       1730       1740
ggcatttcta acagttgtaa tgatgaggat cttccatatg aaaaactttt caaagttccc
      1750       1760       1770       1780       1790       1800
aatgtggata aggtgattga agaaggaaaa aagagagcca caaaattccg gaatatcaaa
      1810       1820       1830       1840       1850       1860
ctgcatagga taagcgacag acctttgccc actgaaaagt tcactgcctc aggctggccc
      1870       1880       1890       1900       1910       1920
tctgttagtg gagacacctt gaaagcctta gctgggaaag tctctgcaga atatgactat
      1930       1940       1950       1960       1970       1980
atggagggcg ttttagatac ttgtctagaa gaaaacattg gagatgatga ttgtatttcg
      1990       2000       2010       2020       2030       2040
ctaccagatg aagttgtaga aacacaacac gtcaatacct ctgttgaatc agacacatct
      2050       2060       2070       2080       2090       2100
gcttatggaa cagcatttga tgcatttgga gggggtgaaa gtggaaagga agcttgccat
      2110       2120       2130       2140       2150       2160
gctattgctg cattatgtga agtttgctcc attgattcct taatatcaaa ttttatcctt
      2170       2180       2190       2200       2210       2220
cctttacagg gaagtaacgt gtcaggaaaa gatggtcgtg tccactgctc cctgaatatc
      2230       2240       2250       2260       2270       2280
aacactgaaa ctggacgctt atcggctaga aggccaaatt tgcagaacca acctgcattg
      2290       2300       2310       2320       2330       2340
gagaaagatc ggtacaaaat ccgtcaggcc ttcatagcat cacctggaaa ttcacttatt
      2350       2360       2370       2380       2390       2400
gttgctgatt atggacagct ggaacttagg attctggcac atcttgctag ttgcgaaagc
      2410       2420       2430       2440       2450       2460
atgaaggaag ctttcatagc tggtggagac ttccactcaa gaacagccat gaatatgtat
      2470       2480       2490       2500       2510       2520
cctcatattc gtgaagctgt tgaaaatggt gaagtgctcc ttgaatggca tccacaacct
      2530       2540       2550       2560       2570       2580
ggacaagaga agccgccagt gccattgttg aaggatgcct ttgcttctga gagaagaaaa
      2590       2600       2610       2620       2630       2640
gcaaagatgc ttaacttctc gattgcgtat gggaagactg ctattgggct gtctagagat
      2650       2660       2670       2680       2690       2700
tggaaggtat caagagaaga agctcaagat acagttaatc tctggtataa tgacagacaa
      2710       2720       2730       2740       2750       2760
gaagtccgga aatggcaaga actacgcaag aaagaagcta tacaaaaagg gtatgtactc
      2770       2780       2790       2800       2810       2820
actttgttgg gaagggctcg taaattccct gaataccgtt cacgtgccca aaagaaccat
      2830       2840       2850       2860       2870       2880
atcgagcgag cagcaatcaa cactcctgtt cagggaagtg cggctgatgt tgctatgtgc
      2890       2900       2910       2920       2930       2940
gctatgctgg agatatcaaa taatcaacgg ctaaaagagc ttggttggaa attgcttcta
      2950       2960       2970       2980       2990       3000
caagttcatg atgaagtaat cttggaagga ccaagtgagt cagcggagaa cgctaaagac
      3010       3020       3030       3040       3050       3060
atagttgtga actgcatgtc tgaacccttc aacggcaaga atattctctc agtcgactta
      3070       3080       3090       3100
tctgttgatg ctaagtgtgc tcagaactgg tatgctggca aataa 

Last modification date: Nov. 19, 2011