Arabidopsis thaliana (L.) Heynh. (mouse-ear cress) [ATH]

FULL NAME: DNA Polymerase gamma 2


STRUCTURE SIMILARITY:
Belongs to the DNA polymerase type-A family.


PROTEIN TYPE(S):
3'-5' exonuclease
A-family DNA polymerase


RELATED PATHWAY(S):
DNA replication
base excision repair (BER)
nucleotide excision repair (NER)
homologous recombination (HR)


Amino acids sequence

        10         20         30         40         50         60
MAMGVSLTSH NNPLLRHLSP SSSWVSRSSS RLSSSPLPSF LFPCRRTLLQ RKLASTDGNV
        70         80         90        100        110        120
GYCTTTVCQG FQHSVHQRSS SVVFNGEWEL RSESNKVRMV PKIIKVGNQT EVAETHQVPG
       130        140        150        160        170        180
TVSAWREEAN KLRERNGQIA RNLDDNGYFN GSVPIISSAP SYETSQKIDY EFKPRGTTRS
       190        200        210        220        230        240
TTATLNKELI GITQSEPVVS LPRKGLDVGD NMDVNPKGEG IQRPLISDKS SGTANGNKNT
       250        260        270        280        290        300
VAISKVERST EPSNVRENLG KIYDKVLIVD NVQAAKDTVA KLVNQFRNHV HSCDTEVSGI
       310        320        330        340        350        360
EVKEETPVDH GELICFSIYC GPEADFGNGK SCIWVDVLGE NGREVLAEFK PYFEDSFIRK
       370        380        390        400        410        420
VWHNYSFDSH IIRNHGIEIS GFHADTMHMA RLWDSARRIK GGYSLEALTS DPKVLGGTQT
       430        440        450        460        470        480
KEEAEFLGKI SMKTIFGKRK LKKDGSEGKI VVIPPVEELQ REDREAWISY SALDAISTLK
       490        500        510        520        530        540
LYESMTKKLQ LMDWHLDGKP VLGRTMLDFY HEFWRPFGEL LVKMEAEGIL VDREYLAEIE
       550        560        570        580        590        600
KVAKAEQQVA GSRFRNWASK YCPDAKYMNI GSDTQLRQLF FGGISNSHDE VLPVEKLFKV
       610        620        630        640        650        660
PNIDKVIEEG KKTPTKFRNI KLHRISDSPL STENFTASGW PSVGGDVLKE LAGKVSAEYD
       670        680        690        700        710        720
FMDDVSDISL EEVVEDDDVE TSETQKSKTD DETDTSAYGT AYVAFGGGER GKEACHAIAS
       730        740        750        760        770        780
LCEVCSIDSL ISNFILPLQG SNVSGKDGRV HCSLNINTET GRLSARRPNL QNQPALEKDR
       790        800        810        820        830        840
YKIRKAFVAS PGNTLVVADY GQLELRILAH LTGCKSMMEA FKAGGDFHSR TAMNMYPHVR
       850        860        870        880        890        900
EAVENGQVIL EWHPEPGEDK PPVPLLKDAF GSERRKAKML NFSIAYGKTA VGLSRDWKVS
       910        920        930        940        950        960
TKEAQETVDL WYNDRQEVRK WQEMRKKEAI EDGYVLTLLG RSRRFPASKS RAQRNHIQRA
       970        980        990       1000       1010       1020
AINTPVQGSA ADVAMCAMLE ISINQQLKKL GWRLLLQIHD EVILEGPIES AEIAKDIVVD
      1030       1040       1050
CMSKPFNGRN ILSVDLSVDA KCAQNWYAAK   

Encoded by POLGAMMA2 gene


OTHER NAME(S):
F8A12.8
F8A12_8
POLGAMMA2
polymerase gamma 2


DESCRIPTION:
DNA Polymerase gamma2. Dual targeting to mitochondria and plastids due to alternative translation initiation.


Nucleic acid sequence

        10         20         30         40         50         60
atggccatgg gggtttctct tacttcccac aataaccctc ttcttcgcca cttatctcct
        70         80         90        100        110        120
tcctcttcct gggtttctcg ttcctcctct cgcctctctt cttctccact cccttccttc
       130        140        150        160        170        180
ctctttcctt gccgtcgaac ccttcttcaa aggaaactag cttccactga tggaaatgtc
       190        200        210        220        230        240
ggttattgta ctactacagt ttgtcaggga tttcagcatt cggttcatca acggtcgtct
       250        260        270        280        290        300
tctgttgtgt ttaacggaga gtgggaactt cgatcggaat ctaacaaggt aaggatggtt
       310        320        330        340        350        360
cctaagatta tcaaggttgg aaatcagacg gaggtagccg aaactcatca agttcctgga
       370        380        390        400        410        420
actgtaagtg cttggaggga agaagctaat aagcttagag aaagaaatgg tcaaattgct
       430        440        450        460        470        480
agaaaccttg atgacaatgg ttatttcaat ggctctgtcc caattatatc tagtgctccg
       490        500        510        520        530        540
tcttatgaaa cctctcagaa gattgattat gagttcaagc ccagagggac cactaggtcc
       550        560        570        580        590        600
actactgcta cactcaataa ggaattgatt ggcattaccc aatctgaacc tgttgtgtca
       610        620        630        640        650        660
ttgccaagga agggtttaga tgttggggat aatatggatg taaatcctaa aggagaggga
       670        680        690        700        710        720
atacagagac ctcttataag cgataagtct tctggtaccg caaatggaaa caagaatact
       730        740        750        760        770        780
gttgccattt ccaaagtgga gagaagcact gaaccttcga atgtccgtga aaaccttggg
       790        800        810        820        830        840
aaaatatatg acaaggttct cattgttgat aatgtgcaag ctgcgaagga taccgtggct
       850        860        870        880        890        900
aagctcgtga atcagtttag gaatcatgtc cattcctgtg atacagaggt gtccgggatt
       910        920        930        940        950        960
gaggttaagg aagaaacgcc tgtcgaccac ggtgaattaa tatgtttcag tatttactgt
       970        980        990       1000       1010       1020
gggccagaag cagattttgg gaatggaaaa tcgtgcatct gggttgatgt tcttggtgaa
      1030       1040       1050       1060       1070       1080
aatggcaggg aggtgttggc cgagtttaaa ccatattttg aagactcgtt catcagaaaa
      1090       1100       1110       1120       1130       1140
gtctggcaca actacagttt cgatagccac atcattagga accatggaat tgagatttct
      1150       1160       1170       1180       1190       1200
ggttttcatg ccgacactat gcacatggca cgattatggg attctgcacg gcggataaaa
      1210       1220       1230       1240       1250       1260
ggtggttatt cgcttgaagc gcttacaagt gacccaaaag ttcttggggg cacacagaca
      1270       1280       1290       1300       1310       1320
aaggaggaag ctgagttcct tggtaaaatt tcgatgaaga ctatttttgg caaacggaaa
      1330       1340       1350       1360       1370       1380
ctgaaaaaag atggatctga agggaaaatc gttgtcattc cccctgttga agagcttcag
      1390       1400       1410       1420       1430       1440
cgagaagatc gagaggcttg gatttcatac tctgccttgg atgcgataag cacactaaag
      1450       1460       1470       1480       1490       1500
ctttacgaga gcatgacaaa gaaactgcaa ttgatggatt ggcatcttga tggaaagcca
      1510       1520       1530       1540       1550       1560
gttttaggaa ggacaatgtt ggatttttac catgagttct ggcgaccctt tggtgaactt
      1570       1580       1590       1600       1610       1620
cttgtaaaaa tggaagcaga agggatactt gtagatagag agtatcttgc tgagatagag
      1630       1640       1650       1660       1670       1680
aaagtagcca aagcggaaca acaagttgct ggtagtaggt ttcgtaattg ggcatctaag
      1690       1700       1710       1720       1730       1740
tattgccccg atgcgaagta tatgaatatt ggcagtgaca cacaattgcg tcagctcttt
      1750       1760       1770       1780       1790       1800
tttggtggca tttccaacag tcatgacgag gtgcttccag ttgaaaagct cttcaaagtc
      1810       1820       1830       1840       1850       1860
cccaatattg ataaggttat tgaagaaggc aaaaaaacac cgacgaagtt tcgaaacatc
      1870       1880       1890       1900       1910       1920
aaactgcata ggataagtga tagcccactg tcaacggaaa attttactgc cagtggttgg
      1930       1940       1950       1960       1970       1980
ccctctgtag gtggggatgt tttgaaagag ttagctggga aagtttctgc tgaatacgac
      1990       2000       2010       2020       2030       2040
tttatggatg atgtctcaga tatttctctg gaagaagttg ttgaggatga tgatgtagaa
      2050       2060       2070       2080       2090       2100
acatcagaaa cacaaaagtc caagacagat gatgaaaccg acacatctgc ttatggaaca
      2110       2120       2130       2140       2150       2160
gcatatgttg catttggagg gggtgaaagg ggaaaggagg catgtcatgc tattgcctca
      2170       2180       2190       2200       2210       2220
ttatgtgaag tttgctctat agactctttg atctcaaatt ttattcttcc gttacaggga
      2230       2240       2250       2260       2270       2280
agtaatgtat caggcaaaga tggtcgcgtc cattgctccc ttaatatcaa tacagaaact
      2290       2300       2310       2320       2330       2340
gggcgcttat cagctagaag gccaaatttg cagaaccaac ctgcattgga gaaggatcgg
      2350       2360       2370       2380       2390       2400
tacaagattc gtaaggcctt tgtagcatcg cctggaaata cacttgttgt ggctgattat
      2410       2420       2430       2440       2450       2460
gggcagttgg aacttagaat tctggcacat cttactggtt gtaaaagcat gatggaagct
      2470       2480       2490       2500       2510       2520
tttaaagcag gcggagattt ccactcaagg acagccatga atatgtatcc acatgttcgt
      2530       2540       2550       2560       2570       2580
gaagctgtag aaaatgggca agtgatcctt gaatggcatc cagaacctgg ggaagacaag
      2590       2600       2610       2620       2630       2640
ccacctgtgc cgttgttaaa ggatgccttt ggttcagaga gaagaaaagc caagatgctt
      2650       2660       2670       2680       2690       2700
aacttttcaa ttgcgtatgg gaaaaccgcg gtcgggcttt ctagagattg gaaggtctcc
      2710       2720       2730       2740       2750       2760
actaaagaag ctcaggaaac agtcgatctc tggtacaatg acaggcaaga agtaaggaaa
      2770       2780       2790       2800       2810       2820
tggcaagaaa tgcgtaagaa agaagctata gaagatgggt atgtactcac tttactagga
      2830       2840       2850       2860       2870       2880
aggtctcgta gatttccggc gtcaaagtca cgtgctcaga gaaatcatat ccaaagagca
      2890       2900       2910       2920       2930       2940
gcaatcaaca ctccagtcca gggaagtgca gctgatgttg ccatgtgtgc aatgttggaa
      2950       2960       2970       2980       2990       3000
atatcgataa atcaacagtt gaagaagctt ggttggagat tgcttctaca gattcatgat
      3010       3020       3030       3040       3050       3060
gaagtaatct tggaaggacc aattgaatca gcggagatcg caaaggacat agttgtggac
      3070       3080       3090       3100       3110       3120
tgtatgtcta agccctttaa cggaaggaat attctctcag tcgatttatc tgttgatgca
      3130       3140       3150
aaatgtgctc aaaactggta tgctgccaaa tag  

Last modification date: Nov. 19, 2011