Arabidopsis thaliana (L.) Heynh. (mouse-ear cress) [ATH]

FULL NAME: DNA gyrase subunit B


STRUCTURE SIMILARITY:
Belongs to the type II topoisomerase family.


PROTEIN TYPE(S):
DNA topoisomerase


RELATED PATHWAY(S):
DNA replication
prokaryotic nucleoid remodeling


Amino acids sequence

        10         20         30         40         50         60
MSSTMESLQE SSTSKDYSSE HIQVLEGLDP VRKRPGMYIG STGSRGLHHL VYEILDNAID
        70         80         90        100        110        120
EAQAGFASKI DVVLHSDDSV SISDNGRGIP TDLHPATGKS SLETVLTVLH AGGKFGGKSS
       130        140        150        160        170        180
GYSVSGGLHG VGLSVVNALS EALEVIVRRD GMEFQQKYSR GKPVTTLTCH VLPPESRGTQ
       190        200        210        220        230        240
GTCIRFWPDK EGFALFTTAI QFDHNTIAGR IRELAFLNPK VTISLKKEDD DPERDVYSEY
       250        260        270        280        290        300
FYAGGLTEYV SWLNTDKKPL HDVLGFRKEI NGSTVDVSLQ WCSDAYSDTM LGYANSIRTI
       310        320        330        340        350        360
DGGTHIEGVK ASLTRTLNSL AKKLKVIKVK GYIIYSSPWI ETKFKYSSAL KRHALRTINN
       370        380        390        400        410        420
EKDISLSGEH VREGLTCIVS VKVPNPEFEG QTKTRLGNPE VRKIVDQSVQ EYLTEYLELH
       430        440        450        460        470        480
PDVLESIISK SLNAYKAALA AKRARELVRS KSVLKSSSLP GKLADCSSTD PAESEIFIVE
       490        500        510        520        530        540
GDSAGGSAKQ GRDRRFQAIL PLRGKILNIE RKDEAAMYKN EEIQNLILGL GLGVKGEDFN
       550        560        570        580        590        600
KENLRYHKII ILTDADVDGA HIRTLLLTFF FRYQRALFDA GCIYVGVPPL FKVERGKQAH
       610        620        630        640        650        660
YCYDDAALKK ITASFPGNAS YNIQRFKGLG EMMPAQLWET TMNPDTRILK QLVVDDAAET
       670        680        690
NMVFSSLMGA RVDVRKELIK SAATRMNLEN LDI  

Encoded by GYRB1 gene


OTHER NAME(S):
DNA GYRASE B1
GYRB1


DESCRIPTION:
Protein targeting to mitochondria is influenced by UTR sequences.


Nucleic acid sequence

        10         20         30         40         50         60
atgtcatcga ccatggagtc tctccaagag agctctacct ctaaggatta tagttccgag
        70         80         90        100        110        120
cacatccaag tgttggaagg cttagaccct gtcaggaaaa gacctgggat gtatattggt
       130        140        150        160        170        180
agcactggat ctcgtggttt gcaccatctg gtttatgaga tccttgacaa cgcaattgac
       190        200        210        220        230        240
gaggcccaag ctggttttgc ttcaaagatc gacgttgttt tacattcaga tgattcagtc
       250        260        270        280        290        300
agcatttcag acaatggacg tgggataccc acagatttgc atcctgcaac gggaaaatcg
       310        320        330        340        350        360
tctttggaaa ctgtccttac ggtcttacat gcaggtggta agtttggtgg caagagtagt
       370        380        390        400        410        420
gggtacagcg tgtctggtgg attgcatggc gtaggtttat cggttgtgaa tgcattgtca
       430        440        450        460        470        480
gaggcattgg aggttatagt tcgcagagat ggaatggagt ttcagcagaa gtattctcgt
       490        500        510        520        530        540
ggaaagcccg taacaacact tacatgtcat gtcctaccac cagagtcaag ggggactcaa
       550        560        570        580        590        600
gggacatgca tccggttctg gcctgacaaa gaaggttttg ccttattcac aactgcaatt
       610        620        630        640        650        660
caattcgacc ataacactat tgctggacgg atcagggagc ttgcttttct caatccaaag
       670        680        690        700        710        720
gttacaatct ctctaaaaaa ggaggatgat gatccagaaa gggacgtgta tagtgaatat
       730        740        750        760        770        780
ttttatgctg gagggttaac tgaatatgtt agctggctaa atactgataa gaaaccgctt
       790        800        810        820        830        840
catgatgtgc tgggtttccg gaaagagata aatggctcca ccgttgacgt ttcacttcag
       850        860        870        880        890        900
tggtgctcag atgcctattc agacacgatg ctgggatacg cgaatagtat tcggaccata
       910        920        930        940        950        960
gatggtggga cacatataga aggtgtgaag gcttcattaa caagaactct aaattccctt
       970        980        990       1000       1010       1020
gcaaaaaagt taaaggttat caaggtcaag ggttatatta tctattcctc tccatggatt
      1030       1040       1050       1060       1070       1080
gagactaaat ttaaatactc atctgcactt aaaagacatg ctttacggac aattaataat
      1090       1100       1110       1120       1130       1140
gaaaaggata ttagcttaag tggggaacat gttagggaag gattgacctg cattgtctca
      1150       1160       1170       1180       1190       1200
gtcaaggttc cgaaccctga gtttgaaggt caaacaaaga caagactagg aaatccagag
      1210       1220       1230       1240       1250       1260
gtgagaaaaa ttgttgacca atcagtccag gagtacctca cggagtactt ggaattgcat
      1270       1280       1290       1300       1310       1320
ccggatgtac ttgaaagcat tatttccaaa tccttgaatg cgtacaaggc tgctctggct
      1330       1340       1350       1360       1370       1380
gccaagaggg ctagggagtt ggtaagatca aaaagcgttt tgaagtcatc ctcacttcct
      1390       1400       1410       1420       1430       1440
gggaaacttg cagattgctc atctacagat cctgcagaat ctgagatttt cattgtcgaa
      1450       1460       1470       1480       1490       1500
ggagattcgg ctggtggcag cgcgaaacag ggtcgtgaca ggcgtttcca ggcaattctt
      1510       1520       1530       1540       1550       1560
cctttgagag gcaaaatttt gaatattgag agaaaggatg aagcagcaat gtataagaac
      1570       1580       1590       1600       1610       1620
gaagaaattc aaaatcttat tcttggcctt ggtcttggag ttaagggaga agattttaac
      1630       1640       1650       1660       1670       1680
aaggagaatc tgcgttacca taaaattatc atcttaacag atgcagatgt tgatggtgca
      1690       1700       1710       1720       1730       1740
catatccgga cacttctgtt gacctttttc ttcagatatc agagagcctt gtttgacgcg
      1750       1760       1770       1780       1790       1800
ggttgcatat acgttggtgt tccacctctt ttcaaggttg agagggggaa acaggcgcac
      1810       1820       1830       1840       1850       1860
tactgctacg atgatgcagc tcttaaaaaa atcactgctt cgttccctgg aaacgcatcc
      1870       1880       1890       1900       1910       1920
tacaacattc agaggttcaa aggtttgggt gagatgatgc ctgcgcagct atgggaaaca
      1930       1940       1950       1960       1970       1980
acgatgaatc cagatacaag gatattgaag caactagttg ttgacgacgc agcagaaacg
      1990       2000       2010       2020       2030       2040
aatatggtct tctcatctct gatgggtgct cgggtcgatg tcaggaagga actcatcaaa
      2050       2060       2070       2080
agtgctgcga ctaggatgaa tctggagaat ctcgacatat aa 

Last modification date: Oct. 5, 2011