Caenorhabditis elegans Maupas (nematode) [CEL]

FULL NAME: Chromosome instability 4


DESCRIPTION:
Chromosome instability protein 4, confirmed by transcript evidence.

STRUCTURE SIMILARITY:
Pfam: DNA_topoisoIV PROSITE: TOPOISOMERASE_II


RELATED PATHWAY(S):
DNA replication


Amino acids sequence

        10         20         30         40         50         60
MSEEDRNVFT SIDKKGGGSK QMDDLNQKCP KRKTSKLKGI PKLEDANDAG TKNSQQCTLI
        70         80         90        100        110        120
LTEGDSAKTL AVSGLSVVGR DKYGVFPFRR KLLNVCDLNV NQIADSAEVN AIIKILGLQY
       130        140        150        160        170        180
TKKYETEDDF KTLRYGKLLI MANHDSDGSQ FKGLLLNFFH RFWPALFKRD FVEDFITPIA
       190        200        210        220        230        240
KATEGKEEVS FYSLPEYSEW RMNTDNWKSY TIKYYNGLGT LTSKEAKKCF SDMVRHRIRF
       250        260        270        280        290        300
KYNGADDDKA VNMAFSKKKI EARTDYLMKL MQDKNQRKQQ GLAEECLYNK ETRFVTLKDF
       310        320        330        340        350        360
FNYEIVCSWN LHSIPCLVDG LKPGQRKVLF ACFKRANKRE VKVAQLAGAV AEISAYHHGE
       370        380        390        400        410        420
QSLMGTIVNL AQDYVGSHNI NLLLPIGQFG TRLQGGKDSA SARSIFAQLS QVTRTLFPAH
       430        440        450        460        470        480
DDNVLRFLYE ENQRIEPEWY CPIIPMVLVN GAQGTGTGWS TNIPNYNPRE LVKNIKRLIA
       490        500        510        520        530        540
GEPQKALAPW YKNFRGKIIQ IDPSRFACYG EVSVLDDNTI EITELPIKQW TQDYKEKVLE
       550        560        570        580        590        600
GLMESSDKKS PVIVDYKEYH TDTTVKFVVK LSPGKLRELE RGQDLHQVFK LQAVINTTCM
       610        620        630        640        650        660
VLFDAAGWLR TYTSPEAITQ EFYDSRQEKY VQRKEYLLGV LQAQSKRLTN QARFILATIN
       670        680        690        700        710        720
NKIVLENKKK TAIVDVLIKM KFDADPVKKW KEDQKLKELR ESGEIELDED DLAAVAVEEG
       730        740        750        760        770        780
EDISSAAKAV ETKLSDYDYL VGLALIKLSE EEKNKLIKES EEKMAEVRVL EKKTWQDLWI
       790        800        810        820        830        840
TDLDNFMSEL TSRRLARKLS LRRTATRWYA MICQRRVTWS SMKESISIRT MTVWSVRMSS

RS     

Encoded by cin-4 gene

FULL NAME: Chromosome INstability


Nucleic acid sequence

        10         20         30         40         50         60
atgtctgaag aagaccgaaa cgtgttcacg tcgatcgaca aaaaaggtgg tggctcgaag
        70         80         90        100        110        120
caaatggacg acctcaacca aaagtgcccc aagaggaaga cttccaagct gaagggcatc
       130        140        150        160        170        180
ccaaagctcg aagatgcgaa cgacgctgga accaaaaatt cccaacagtg tacattgatt
       190        200        210        220        230        240
ctgacggagg gagactcggc caaaacgctt gctgtttcgg gactttcagt cgttggacgc
       250        260        270        280        290        300
gacaaatatg gagtattccc atttcgaaga aaattgctaa atgtctgcga tttaaatgtg
       310        320        330        340        350        360
aatcaaatcg ccgatagtgc tgaggtcaat gccatcatca agattctggg actccaatac
       370        380        390        400        410        420
acgaagaagt acgagacaga agatgacttt aagactcttc gatacgggaa attgttaatc
       430        440        450        460        470        480
atggcaaatc atgattcaga cggctctcaa ttcaaaggac ttctgctcaa cttctttcat
       490        500        510        520        530        540
cgcttttggc ctgcgctctt taaacgcgac ttcgtcgagg atttcatcac tccaattgcc
       550        560        570        580        590        600
aaagccaccg aaggaaaaga ggaagtttcg ttttattcgc tcccagaata ttctgagtgg
       610        620        630        640        650        660
agaatgaata cggataactg gaagtcgtat acgatcaagt actacaacgg attggggaca
       670        680        690        700        710        720
ttgacttcta aggaagctaa gaagtgcttc tcggacatgg ttcgtcatcg tatccgcttc
       730        740        750        760        770        780
aagtacaacg gagctgatga tgataaagct gtcaacatgg ctttttcaaa gaagaagatt
       790        800        810        820        830        840
gaagcaagga cagactatct catgaagttg atgcaggata agaatcaaag aaagcagcag
       850        860        870        880        890        900
gggctggctg aagagtgcct ctacaacaaa gaaactcgat ttgtcaccct aaaagatttc
       910        920        930        940        950        960
ttcaactacg aaatagtttg ctcatggaat ttgcattcaa ttccatgtct tgtggatggt
       970        980        990       1000       1010       1020
ttgaaaccag gacagcggaa ggttctcttc gcgtgcttca aaagagcaaa caagcgtgaa
      1030       1040       1050       1060       1070       1080
gtcaaagtag ctcaactggc tggagctgtc gctgaaattt ctgcttacca tcacggagaa
      1090       1100       1110       1120       1130       1140
cagtcgctta tgggaacaat tgtgaatctc gctcaagatt acgttggctc ccacaacatc
      1150       1160       1170       1180       1190       1200
aacctgcttc ttcctatcgg gcagtttggt actcgtctcc aaggtggaaa ggacagtgct
      1210       1220       1230       1240       1250       1260
tcagctcgtt ccatcttcgc tcaactgtcg caagtcactc gtacactctt cccggctcac
      1270       1280       1290       1300       1310       1320
gatgacaatg tccttcgttt cctttatgaa gaaaatcagc gtattgagcc agaatggtat
      1330       1340       1350       1360       1370       1380
tgcccgatta ttccaatggt tctcgtcaat ggagctcaag gaaccggtac tggatggtcc
      1390       1400       1410       1420       1430       1440
acgaacattc ctaattacaa tccacgtgaa ctggtcaaga acatcaagcg tcttatcgcc
      1450       1460       1470       1480       1490       1500
ggcgagccac agaaagcctt agctccatgg tacaagaact tccgcggaaa gattattcaa
      1510       1520       1530       1540       1550       1560
atcgacccga gtcgatttgc atgctatggt gaagtttctg tgcttgatga caatacaatt
      1570       1580       1590       1600       1610       1620
gagatcactg agttgccaat caaacagtgg actcaagact acaaagagaa ggttttggaa
      1630       1640       1650       1660       1670       1680
ggattgatgg agagctcgga caagaaatcg cctgttattg tcgactacaa agagtatcac
      1690       1700       1710       1720       1730       1740
acagatacta ctgttaagtt cgtcgtgaag ctctcgccgg gaaaacttcg tgaattggag
      1750       1760       1770       1780       1790       1800
cgcggtcagg atcttcatca agtcttcaag ctccaagctg tcatcaacac tacgtgcatg
      1810       1820       1830       1840       1850       1860
gtacttttcg atgctgccgg atggcttcgt acatacactt cgccagaagc gattactcaa
      1870       1880       1890       1900       1910       1920
gagttctacg atagccgcca agagaagtac gtacagagaa aggagtacct cctcggagtt
      1930       1940       1950       1960       1970       1980
cttcaggctc agagcaagcg tctcactaac caggctcgtt ttatcctcgc cacgatcaac
      1990       2000       2010       2020       2030       2040
aacaagattg ttctcgagaa caagaagaag acggcgattg tcgatgtttt gatcaagatg
      2050       2060       2070       2080       2090       2100
aagttcgatg ctgatccagt gaagaagtgg aaggaggacc aaaagctcaa agagcttcgt
      2110       2120       2130       2140       2150       2160
gaatctggag aaatcgagct ggacgaagat gatctagctg cagtcgccgt cgaagagggc
      2170       2180       2190       2200       2210       2220
gaagacattt cctctgctgc gaaggccgtt gaaaccaagc tatccgacta cgattacctc
      2230       2240       2250       2260       2270       2280
gtcggattag ctctcatcaa gctttcggaa gaagagaaga ataagctcat caaagaatcg
      2290       2300       2310       2320       2330       2340
gaggagaaga tggctgaggt tcgagttctg gagaagaaga cctggcaaga tctttggatt
      2350       2360       2370       2380       2390       2400
accgacctag acaatttcat gtctgaattg acaagcagga ggctcgcgag aaagctgagt
      2410       2420       2430       2440       2450       2460
ctaaggcgaa ccgcgacgcg atggtatgcg atgatatgtc agaggagagt gacgtggagt
      2470       2480       2490       2500       2510       2520
tcgatgaagg aatcgatttc aattcggacg atgacggtgt ggagcgtgag aatgtcgtct

cgaagctga     

Last modification date: Nov. 19, 2011