Caenorhabditis elegans Maupas (nematode) [CEL]

FULL NAME: Probable DNA polymerase delta small subunit


DESCRIPTION:
The function of the small subunit is not yet clear.

STRUCTURE SIMILARITY:
Belongs to the DNA polymerase delta/II small subunit family.


CATALYTIC ACTIVITY:
Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).


RELATED PATHWAY(S):
DNA replication
base excision repair (BER)
nucleotide excision repair (NER)
mismatch repair (MMR)
homologous recombination (HR)


Amino acids sequence

        10         20         30         40         50         60
METAWSNILN YKNVSDRYIL TEKDKKGAFT RQYFEVYEAR LKELKPRILE NAEREIGKGK
        70         80         90        100        110        120
FTHSQLSDAK QDEEIFVVGV IVKRIAARPS ILKSLLNEDK VAYDDYEEDA EEDEVKRYAG
       130        140        150        160        170        180
SIEDRIELES DKQTVRLEGN ISMDECATGC CVGVLGKLGK EGVFHVNRLV WPSVKVPKKV
       190        200        210        220        230        240
AVDGTIAFVS GLDLTGDLED DRLTISGLEF MADWMNVQVG NENQCPPIDR LVVIGPLVET
       250        260        270        280        290        300
KSNGCDVQSV VRTLTLSRAE KHSSTASLIT VDKIINSIAE KPLVNTVDVT PGVGDPCSSM
       310        320        330        340        350        360
WPLPPIHRVC LPRCGMSDKK VNLVTNPYEF EVNGLRVMTM SGENVSELLR TSLKWTGADA
       370        380        390        400        410        420
IENIIKWQHV APNCPDTLDA FPVAERDPLI MDITPHVIIC GNQPHAEFRH IPIDGSNCLV
       430        440        450
VCLPKFSKTR VACFLNLSDL SLKWQNFDHQ F  

Encoded by gid:178077 gene


Nucleic acid sequence

        10         20         30         40         50         60
atggaaaccg cttggtccaa catcctaaac tataagaatg tctcagatcg atacattctc
        70         80         90        100        110        120
actgaaaaag ataaaaaagg tgcgttcact agacagtact ttgaagtcta cgaagctcgc
       130        140        150        160        170        180
ttgaaggaac tgaaacctcg tattttggaa aatgcagaac gtgaaattgg caagggaaaa
       190        200        210        220        230        240
ttcacgcatt cacaattgag cgatgctaaa caagacgagg aaatcttcgt ggtcggcgtt
       250        260        270        280        290        300
attgtaaaga gaatagctgc aagaccatca attttgaaat cgttgctcaa cgaggataaa
       310        320        330        340        350        360
gtggcttatg atgattatga agaagatgcc gaagaagacg aagtgaaaag atacgctgga
       370        380        390        400        410        420
agcattgaag atcgaatcga attggaatca gataaacaga cagtacgtct ggaaggaaat
       430        440        450        460        470        480
atttcaatgg atgagtgtgc aactggttgt tgtgttggag ttcttggaaa attaggaaaa
       490        500        510        520        530        540
gaaggagtat ttcatgtgaa tcgtttggtt tggccatctg taaaagttcc aaagaaagtg
       550        560        570        580        590        600
gctgtcgacg ggactatcgc tttcgtcagt ggactcgatc taactggaga tttggaagac
       610        620        630        640        650        660
gatcgactca caatctctgg tcttgaattt atggctgatt ggatgaatgt tcaagttgga
       670        680        690        700        710        720
aatgagaatc aatgtccacc gattgatcgt cttgtagtta ttggtccact ggttgaaaca
       730        740        750        760        770        780
aaatcaaatg gttgtgatgt tcagtcagtc gttcgaacac ttactctttc acgtgcagag
       790        800        810        820        830        840
aaacattctt caacagcatc actaattact gtagacaaaa ttattaattc aattgctgaa
       850        860        870        880        890        900
aaacctcttg ttaacactgt cgacgtgact cctggtgttg gtgatccatg ctcatcgatg
       910        920        930        940        950        960
tggccactgc cacctattca cagagtttgt cttccacgtt gtggaatgag tgataaaaaa
       970        980        990       1000       1010       1020
gtgaatcttg tgacaaatcc atatgaattt gaagtcaatg gactacgtgt gatgacaatg
      1030       1040       1050       1060       1070       1080
tctggcgaaa acgtgagcga gcttcttcgt acttccctga aatggacggg agctgatgct
      1090       1100       1110       1120       1130       1140
attgagaata tcattaaatg gcaacatgtg gcaccaaatt gtccagatac tcttgatgca
      1150       1160       1170       1180       1190       1200
ttcccagtgg ctgaaagaga tcctctgatc atggacatca caccgcatgt gatcatttgt
      1210       1220       1230       1240       1250       1260
ggaaatcaac ctcacgccga gttccgtcat attccaattg atggatcaaa ttgccttgtt
      1270       1280       1290       1300       1310       1320
gtttgcctgc ccaaattctc caaaactcgt gtcgcctgct ttctcaactt atctgatctt
      1330       1340       1350
tccctgaagt ggcaaaactt tgatcatcag ttctaa  

Last modification date: Jan. 7, 2012