Schizo-saccharomyces pombe Lindner (fission yeast) [SPO]

FULL NAME: Replication factor C subunit 5


DESCRIPTION:
The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins PCNA and activator 1.

STRUCTURE SIMILARITY:
Belongs to the activator 1 small subunits family.


RELATED PATHWAY(S):
DNA replication
nucleotide excision repair (NER)
mismatch repair (MMR)


Amino acids sequence

        10         20         30         40         50         60
MLWLDQYRPK TLASLDYHKQ LSERLISLSS TNEFPHLLVY GPSGAGKKTR VVAILRELYG
        70         80         90        100        110        120
PGSEKLKIDQ RTFLTPSSKK LQINIVSSLH HLEITPSDVG NYDRVIMQEL LKDVAQSAQV
       130        140        150        160        170        180
DLQAKKIFKV VVINVADELT RDAQAALRRT MEKYSNNIRL ILIANSTSKI IEPIRSRTLM
       190        200        210        220        230        240
VRVAAPTPEE IILVMSKILT AQGLEAPDSL LNNIANNCDR NLRKAILLLE TVHAKSPGNK
       250        260        270        280        290        300
QLIDTGAQLP LPDWQTFIQQ VGDSMLQEQS PARILAVRSM LYDLLSHCIP PTTILKELLS
       310        320        330        340        350
FFLSKVDTKL HPYLIQAAAN YEHRTRMGNK SIFHLEAFVA YFMKVYAMLQ LGMELPSY

Encoded by rfc5 gene


Nucleic acid sequence

        10         20         30         40         50         60
atgctttggt tagatcaata ccgtccaaag acgcttgcat ctttggacta tcacaaacaa
        70         80         90        100        110        120
ctctcagaac gtcttatttc cttgtcgtct actaatgagt ttccccattt gttagtgtat
       130        140        150        160        170        180
gggcccagcg gagcaggaaa aaaaactcgg gtggttgcta tattacgaga attgtatgga
       190        200        210        220        230        240
cctggctcag agaagttgaa aatcgatcaa agaactttct tgactcctag tagtaaaaaa
       250        260        270        280        290        300
ttacagatca atattgtatc aagtcttcat catttggaaa ttacgcccag cgatgtcgga
       310        320        330        340        350        360
aattacgacc gagtcattat gcaggagctt ttaaaagatg tggctcaatc tgcacaagtt
       370        380        390        400        410        420
gacttacaag ctaaaaagat atttaaagtc gttgtaatca atgtggctga cgaattaact
       430        440        450        460        470        480
agagacgctc aagcggctct tcgtcgtacc atggaaaaat attccaataa cattcgtctg
       490        500        510        520        530        540
atcttaattg ccaattctac gtcgaaaatt attgagccta ttcgatctcg tacgttaatg
       550        560        570        580        590        600
gttcgtgttg cagcccctac gccagaggaa attatcctgg taatgtctaa aatcttgaca
       610        620        630        640        650        660
gcccaaggcc ttgaagctcc ggattctctg cttaataata tagcgaataa ttgtgatcgg
       670        680        690        700        710        720
aatcttagaa aagccatctt gctcttagag accgttcatg caaaatctcc aggcaacaag
       730        740        750        760        770        780
caactaatcg atactggtgc gcaactccct ttgcctgatt ggcaaacatt tatccagcag
       790        800        810        820        830        840
gtcggtgatt ccatgcttca agaacaaagc cctgcacgta tcctggctgt tcgctcaatg
       850        860        870        880        890        900
ctgtatgatc ttctttctca ctgcattccc cctaccacaa ttttgaagga acttctgtct
       910        920        930        940        950        960
ttttttcttt caaaagtgga cactaaattg catccatact taattcaagc tgcagcgaat
       970        980        990       1000       1010       1020
tatgaacata ggactcggat gggcaacaaa tcaatttttc acctagaggc ttttgttgca
      1030       1040       1050       1060       1070
tattttatga aagtttatgc tatgttacaa ctaggtatgg agttaccttc ttattag

Last modification date: Oct. 2, 2011