Drosophila melanogaster Meigen (fruit fly) [DME]

FULL NAME: DNA-directed RNA polymerase II subunit RPB9


DESCRIPTION:
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB9 is part of the upper jaw surrounding the central large cleft and thought to grab the incoming DNA template (By similarity).

STRUCTURE SIMILARITY:
Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
Contains 1 TFIIS-type zinc finger.


RELATED PATHWAY(S):
transcription


Amino acids sequence

        10         20         30         40         50         60
MTTAFDAAHT EGPGFVGIRF CQECNNMLYP KEDKENKILL YACRNCDYKQ EADSNCIYVN
        70         80         90        100        110        120
KIMHEIDELT HIVPDVISDP TLPRTEDHAC PKCSHREAVF FQAQTRRAEE EMRLYYVCTN

QNCTHRWTE     

Encoded by RpII15 gene

FULL NAME: RNA polymerase II 15kD subunit


OTHER NAME(S):
CG3284
Dmel\CG3284
dRPB9
H5
l(3)88Be
l(3)Z23
pol II
Pol II
polII
PolII
RNA pol II
RNA Pol II
RNA polII
RNAP
RNAP II
RNApolII
RPII15
RpII215


Nucleic acid sequence

        10         20         30         40         50         60
atgacgactg cctttgatgc cgcacacact gaggggccgg gattcgtggg cattcggttc
        70         80         90        100        110        120
tgccaggagt gcaacaacat gctgtacccc aaggaggaca aggagaacaa gatcctgctg
       130        140        150        160        170        180
tacgcctgcc ggaattgcga ttacaaacag gaggcggact ccaactgcat ctacgtgaac
       190        200        210        220        230        240
aagattatgc acgagatcga cgagctgacc cacattgtgc ccgacgtgat ttccgatccc
       250        260        270        280        290        300
acgctgccgc gcaccgaaga ccacgcttgt cccaagtgct cccatcggga ggcggtcttc
       310        320        330        340        350        360
ttccaggcgc aaactcgtcg cgccgaagag gagatgcgac tgtactacgt gtgcaccaac
       370        380        390
cagaactgca cccaccgttg gacggagtag   

Last modification date: Oct. 2, 2011