Proteins

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ORTHOLOGY CLASS Homo sapiens L. (human) [HSA] Mus musculus L. (mouse) [MMU] Caenorhabditis elegans Maupas (nematode) [CEL] Drosophila melanogaster Meigen (fruit fly) [DME] Saccharomyces cerevisiae Meyen ex E.C. Hansen (budding yeast) [SCE] Schizo-saccharomyces pombe Lindner (fission yeast) [SPO] Escherichia coli Migula (bacterium) K-12 MG1655 [ECO] Arabidopsis thaliana (L.) Heynh. (mouse-ear cress) [ATH]
ko:K11676
(Ino eighty subunit 2)
IES2 ies2
ko:K03121
(transcription initiation factor TFII-I)
GTF2I
GTF2IRD1
Gtf2ird1
Gtf2i
ko:K03122
(transcription initiation factor TFIIA large subunit)
GTF2A1L
GTF2A1
Gtf2a1l
Gtf2a1
pqn-51 TfIIA-L TOA1 gi:19112462 gi:30680153
gi:18390773
gi:15237841
ko:K03124
(transcription initiation factor TFIIB)
GTF2B Gtf2b ttb-1 TfIIB SUA7 gi:19115141 gi:15228267
gi:15230282
gi:15228689
PBRP
TFIIB
gi:15236883
ko:K03126
(transcription initiation factor TFIID subunit 12)
TAF12 Taf12 Taf12 TAF12 taf12 TAF12
ko:K03128
(transcription initiation factor TFIID subunit 2)
TAF2 Taf2 taf-2 Taf2 TAF2 taf2 TAF2
ko:K03130
(transcription initiation factor TFIID subunit 5)
TAF5L
TAF5
Taf5
Taf5l
taf-5 wda
can
Taf5
TAF5 taf5
taf73
TAF5
ko:K03131
(transcription initiation factor TFIID subunit 6)
TAF6
TAF6L
Taf6
Taf6l
taf-6.1 Taf6
mia
TAF6 taf6 TAF6B
TAFII59
ko:K03133
(transcription initiation factor TFIID subunit 9B)
TAF9B Taf9b taf-9 e(y)1 TAF9 taf9 TAFII21
ko:K03135
(transcription initiation factor TFIID subunit 11)
TAF11-like
TAF11
Taf11 taf-11.3
taf-11.1
taf-11.2
Taf11 TAF11 taf11 TAF11
TAF11b
ko:K03136
(transcription initiation factor TFIIE subunit alpha)
GTF2E1 Gtf2e1
gi:85701612
gi:17544578 TfIIEalpha TFA1 tfa1 gi:145340451
gi:15233409
gi:18379079
ko:K03138
(transcription initiation factor TFIIF subunit alpha)
GTF2F1 Gtf2f1 gi:17531417 TfIIFalpha TFG1 Tfg1 RAP74
ko:K03140
(transcription initiation factor TFIID/TFIIF subunit)
TAF14 tfg3
ko:K14649
(transcription initiation factor TFIID subunit 8)
TAF8 Taf8 taf-8 Taf8 TAF8
ko:K14650
(transcription initiation factor TFIID subunit 3)
TAF3 Taf3 TAF3 taf3
ko:K10744
(ribonuclease H2 subunit B)
RNASEH2B Rnaseh2b RnaseH2B DMel_CG11164 (RnaseH2B hp) putative Rnh2B putative RnaseH2b
ko:K06641
(serine/threonine-protein kinase Chk2 [EC:2.7.11.1])
CHEK2 (CHK2) Chek2 chk-2 lok DUN1
ko:K03111
(single-strand DNA-binding protein)
SSBP1 Ssbp1 mtSSB Ssb At3g18580
ko:K03469
(ribonuclease HI [EC:3.1.26.4])
RNASEH1 Rnaseh1 rnh-1.3
rnh-1.0
rnh1 RNH1 rnh1 rnhA
ko:K02320
(DNA polymerase alpha subunit A [EC:2.7.7.7])
POLα (POLA) mPolα (mPolA) DNA pol DNApol-alpha180 POL1 pol1 ICU2
ko:K02321
(DNA polymerase alpha subunit B)
POLA2 Pola2 div-1 DNApol-alpha73 POL12 spb70 POLA2
ko:K02684
(DNA primase small subunit [EC:2.7.7.-])
PRIM1 Prim1 Pri-1 DNApol-alpha50 PRI1 spp1 POLA3
ko:K02542
(minichromosome maintenance protein 6)
MCM6 Mcm6 mcm-6 Mcm6 MCM6 mcm6 MCM6
ko:K00567
(methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63])
MGMT Mgmt Y62E10A.5a Dmel_CG1303 Mgt1p Ogt
ko:K02685
(DNA primase large subunit [EC:2.7.7.-])
PRIM2 Prim2 pri-2 DNApol-alpha60 PRI2 spp2 At1g67320
ko:K02327
(DNA polymerase delta subunit 1 [EC:2.7.7.7])
POLδ (POLD) mPolδ (mPolD) DNA Pol delta DNApol-delta POL3
POL3
cdc6 POLD1
ko:K02328
(DNA polymerase delta subunit 2)
POLD2 Pold2 DNA Pol delta sub 2 DNA pol delta small sub POL31 cdc1 POLD2
ko:K03504
(DNA polymerase delta subunit 3)
POLD3 Pold3 PolD3 Dmel_CG3975
CG3975
POL32 cdc27 POLD3
ko:K03505
(DNA polymerase delta subunit 4)
POLD4 Pold4 cdm1 POLD4
ko:K02324
(DNA polymerase epsilon subunit 1 [EC:2.7.7.7])
POLε (POLE) mPolε (mPolE) DNA Pol epsilon sub 1 (hypothetical protein) DNApol-epsilon POL2 cdc20 TIL2
TIL1
ko:K02210
(minichromosome maintenance protein 7 (cell division control protein 47))
MCM7 Mcm7 mcm-7 Mcm7 MCM7
MCM7
mcm7 PRL
ko:K03868
(RING-box protein 1)
RBX1 Rbx1 rbx-1 Roc1b
Roc1a
HRT1 rbx1 RBX1
gi:15229164
ko:K02326
(DNA polymerase epsilon subunit 3 [EC:2.7.7.7])
POLE3 Pole3 Chrac-14 DPB4 dpb4
ko:K02540
(minichromosome maintenance protein 2)
MCM2 Mcm2 mcm-2 Mcm2 MCM2 mcm2 MCM2
ko:K02541
(minichromosome maintenance protein 3)
MCM3 Mcm3 mcm-3 Mcm3 MCM3 mcm3 MCM3
ko:K02209
(minichromosome maintenance protein 5 (cell division control protein 46))
MCM5 Mcm5 mcm-5 Mcm5 MCM5 MCM5
ko:K07466
(replication factor A1)
RPA1 Rpa1 rpa-1 RpA-70 RFA1 ssb1 RPA1A
ko:K10739
(replication factor A2)
RPA2 Rpa2 rpa-4
rpa-2
RPA2 RFA2 ssb2 RPA32B
RPA2
ko:K10740
(replication factor A3)
RPA3 Rpa3 Dmel_CG15220 ssb3 F3C22_30
At4g18590
ko:K04802
(proliferating cell nuclear antigen)
PCNA Pcna pcn-1 Pcna2
Mus209 (Pcna)
POL30 pcn1 PCNA2
PCNA1
ko:K10755
(replication factor C subunit 2/4)
RFC4
RFC2
Rfc2
Rfc4
rfc-4
rfc-2
CG8142
RfC4
RFC2
RFC4
rfc2
rfc4
RFC2
RFC2/4
ko:K10756
(replication factor C subunit 3/5)
RFC3
RFC5
Rfc3
Rfc5
rfc-3
ARPA
RfC3
RfC38
RFC3
RFC5
rfc3
rfc5
RFC3
putative RFC3/5
ko:K10742
(DNA replication ATP-dependent helicase Dna2 [EC:3.6.4.12])
DNA2 Dna2 dna-2 Dmel_CG2990 DNA2 dna2 Dna2
ko:K10745
(ribonuclease H2 subunit C)
RNASEH2C Rnaseh2c Dmel_CG30105 SPAC12B10.15c At2g39440
ko:K04799
(flap endonuclease-1 [EC:3.-.-.-])
FEN1 (DNase IV) Fen1 crn-1 Fen1 RAD27 rad2 AT5G26680
ko:K10747
(DNA ligase 1 [EC:6.5.1.1])
LIG1 Lig1 lig-1 DmDNA Lig I CDC9 cdc17
adl1
At1g49250
ATLIG1
ko:K02345
(DNA polymerase III subunit theta [EC:2.7.7.7])
HolE
ko:K02337
(DNA polymerase III subunit alpha [EC:2.7.7.7])
DnaE (PolC)
ko:K03470
(ribonuclease HII [EC:3.1.26.4])
rnhB
ko:K10900
(werner syndrome ATP-dependent helicase [EC:3.6.4.12])
RECQL2 (WRN) Wrn wrn-1
ko:K02340
(DNA polymerase III subunit delta [EC:2.7.7.7])
HolA
ko:K02339
(DNA polymerase III subunit chi [EC:2.7.7.7])
HolC
ko:K02314
(replicative DNA helicase [EC:3.6.4.12])
dnaB
ko:K02316
(DNA primase [EC:2.7.7.-])
dnaG
ko:K02335
(DNA polymerase I [EC:2.7.7.7])
DNA Pol I POLGAMMA2
POLGAMMA1
ko:K01972
(DNA ligase (NAD+) [EC:6.5.1.2])
DNA ligase B
DNA ligase I
ko:K10802
(high mobility group protein B1)
HMGB1 Hmgb1 Dsp1 HMGB1
ko:K03649
(TDG/mug DNA glycosylase family protein [EC:3.2.2.-])
TDG Tdg
Gm5806 (TDG/Mug-like)
Thd1 thp1 Mug
ko:K03016
(DNA-directed RNA polymerases I, II, and III subunit RPABC3)
POLR2H Polr2h rpb-8 Rpb8 RPB8 rpb8 NRPB8B
NRPB8A
ko:K00558
(DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37])
DNMT3A
DNMT3L
DNMT3B
DNMT1
Dnmt3a
Dnmt3l
Dnmt3b
Dnmt1
Dcm AT4G08990
CMT1
MEE57
MET1
CMT3
DMT2
CMT2
ko:K02216
(serine/threonine-protein kinase Chk1 [EC:2.7.11.1])
CHEK1 (CHK1) Chek1 chk-1 grp CHK1 chk1
ko:K04451
(tumor protein p53)
TP53 Trp53
ko:K10905
(ATR interacting protein)
ATRIP Atrip
ko:K15341
(DNA cross-link repair 1B protein [EC:3.1.-.-])
DCLRE1B (5' exo APOLLO) Dclre1b gi:15223519
ko:K11136
(regulator of telomere elongation helicase 1 [EC:3.6.4.12])
RTEL1 Rtel1 rtel-1 gi:24639946 gi:42563365
ko:K10732
(GINS complex subunit 1)
GINS1 Gins1 GINS1 hypothetical protein Psf1 PSF1 Psf1 PSF1
ko:K11680
(non-histone protein 10)
NHP10
ko:K03702
(excinuclease ABC subunit B)
UvrB
ko:K03703
(excinuclease ABC subunit C)
UvrC
ko:K03503
(DNA polymerase V [EC:3.4.21.-])
UmuD
ko:K03502
(DNA polymerase V)
DNA Pol V
ko:K02336
(DNA polymerase II [EC:2.7.7.7])
DNA Pol II
ko:K03165
(DNA topoisomerase III [EC:5.99.1.2])
TOP3B
TOP3A
Top3a
Top3b
top-3
Top-3
Top3beta
Top3alpha
TOP3 top3 TOP3A
ko:K01151
(deoxyribonuclease IV [EC:3.1.21.2])
Nfo (endo IV)
ko:K10776
(DNA ligase 3 [EC:6.5.1.1])
LIG3 Lig3 lig3
ko:K03014
(DNA-directed RNA polymerases I, II, and III subunit RPABC2)
POLR2F Polr2f rpb-6 RpII18 RPO26 rpb6 NRPB6A
NRPB6B
ko:K03660
(N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18])
hOGG1 Ogg1 Ogg1 OGG1 OGG1
ko:K10773
(endonuclease III [EC:4.2.99.18])
NTHL1 Nthl1 nth-1 Dmel_CG9272 NTG1
NTG2
nth1 Nth (endo III) NTH2 (AtEndo III)
ATNTH1
ko:K10568
(endonuclease VIII-like 2 [EC:3.2.2.- 4.2.99.18])
NEIL2 Neil2
ko:K03648
(uracil-DNA glycosylase [EC:3.2.2.27])
UNG Ung ung-1 UNG1 ung1 Ung UNG
ko:K03575
(A/G-specific adenine glycosylase [EC:3.2.2.-])
MUTYH Mutyh myh1 MutY gi:42566730
ko:K10801
(methyl-CpG-binding domain protein 4 [EC:3.2.2.-])
MBD4 (MED1) Mbd4 ATMBD4
ko:K10772
(AP endonuclease 2 [EC:4.2.99.18])
APEX2 Apex2 APN2 apn2 AtEndo 2
ko:K02330
(DNA polymerase beta subunit [EC:2.7.7.7 4.2.99.-])
POLβ (POLB) mPolβ (mPolB)
ko:K10803
(DNA-repair protein XRCC1)
XRCC1 Xrcc1 XRCC1 ATXRCC1
ko:K10563
(formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18])
Fpg (MutM) AtMMH-1
ko:K01247
(DNA-3-methyladenine glycosylase II [EC:3.2.2.21])
MAG1 mag1
gi:19112661
AlkA gi:15230333
gi:145323948
gi:18410802
ko:K07462
(single-stranded-DNA-specific exonuclease [EC:3.1.-.-])
RecJ
ko:K10883
(crossover junction endonuclease EME2)
EME2 Eme2
ko:K10609
(cullin 4)
CUL4B
CUL4A
Cul4b
Cul4a
cul-4 cul-4 pcu4 CUL4
ko:K10140
(DNA damage-binding protein 2)
DDB2 (XPE) Ddb2 DDB2
ko:K10839
(UV excision repair protein RAD23)
RAD23B
RAD23A
Rad23a
Rad23b
rad-23 Rad23 RAD23 rhp23 RAD23
gi:15232924
gi:145334669
gi:15221013
ko:K09456
(putative acyl-CoA dehydrogenase)
AidB
ko:K10840
(centrin-2)
CETN2 Cetn2
ko:K10841
(DNA excision repair protein ERCC-6)
ERCC6 (CSB) Ercc6 csb-1 RAD26 rhp26 CHR8
ko:K02202
(cyclin-dependent kinase 7 [EC:2.7.11.22])
CDK7 Cdk7 cdk-7 Cdk7 KIN28 mcs6 gi:15220917
gi:15219522
CAK4
CDKD1;3
CDKD1;1
CAK4
ko:K10849
(DNA excision repair protein ERCC-1)
ERCC1 Ercc1 gi:25144926 Ercc1 RAD10 swi10 ERCC1
ko:K06634
(cyclin H)
CCNH Ccnh cyh-1 CycH CCL1 mcs2 CYCH;1
CYCH;1
ko:K10843
(DNA excision repair protein ERCC-3 [EC:3.6.4.12])
ERCC3 (XPB) Ercc3 gi:17556358 hay SSL2 ptr8 XPB2
XPB2
ko:K10845
(TFIIH basal transcription factor complex TTD-A subunit)
GTF2H5 Gtf2h5 gi:17556222 Tfb5 TFB5 tfb5 gi:15221323
gi:15221323
ko:K03141
(transcription initiation factor TFIIH subunit 1)
GTF2H1 Gtf2h1 gi:71992201 Tfb1 TFB1 tfb1 gi:240255685
gi:240255685
gi:42562765
gi:42562765
ko:K03143
(transcription initiation factor TFIIH subunit 3)
GTF2H3 Gtf2h3 TFIIH sub 3 (hypothetical protein) Tfb4 TFB4 tfb4 gi:18394597
gi:18394597
ko:K10846
(DNA excision repair protein ERCC-5)
ERCC5 (XPG) Ercc5 xpg-1 mus201 RAD2 rad13 UVH3
ko:K10847
(DNA-repair protein complementing XP-A cells)
XPA Xpa xpa-1 Xpac RAD14 rhp14
ko:K03015
(DNA-directed RNA polymerase II subunit RPB7)
POLR2G Polr2g rpb-7 Rpb7 RPB7 rpb7 NRPB7
ko:K03017
(DNA-directed RNA polymerase II subunit RPB9)
POLR2I Polr2i rpb-9 RpII15 RPB9 rpb9 NRPB9B
NRPB9A
ko:K03584
(DNA repair protein RecO (recombination protein O))
RecO
ko:K08734
(DNA mismatch repair protein MLH1)
MLH1 Mlh1 mlh-1 Mlh1 MLH1 mlh1 MLH1
ko:K10858
(DNA mismatch repair protein PMS2)
PMS2 Pms2 pms-2 Pms2 PMS1 pms1 PMS1
ko:K08737
(DNA mismatch repair protein MSH6)
MSH6 Msh6 msh-6 Msh6 MSH6 msh6 MSH6
ko:K08735
(DNA mismatch repair protein MSH2)
MSH2 Msh2 msh-2 spel1 MSH2 msh2 MSH2
ko:K08739
(DNA mismatch repair protein MLH3)
MLH3 Mlh3 MLH3 MLH3
ko:K10746
(exonuclease 1 [EC:3.1.-.-])
EXO1 (HEX1) Exo1 gi:17553464 tos EXO1 exo1 gi:145324070
ko:K03555
(DNA mismatch repair protein MutS)
MutS
ko:K03572
(DNA mismatch repair protein MutL)
MutL
ko:K01141
(exodeoxyribonuclease I [EC:3.1.11.1])
sbcB
ko:K03602
(exodeoxyribonuclease VII small subunit [EC:3.1.11.6])
xseB
ko:K10857
(exodeoxyribonuclease X [EC:3.1.11.-])
exoX
ko:K06187
(recombination protein RecR)
RecR
ko:K10870
(RAD51-like protein 2)
RAD51C Rad51c spn-D gi:18406752
ko:K10866
(DNA repair protein RAD50 [EC:3.6.-.-])
RAD50 Rad50 rad-50 rad50 RAD50 rad50 RAD50
ko:K10865
(double-strand break repair protein MRE11)
MRE11A Mre11a mre-11 mre11 MRE11 rad32 MRE11
ko:K04482
(DNA repair protein RAD51)
RAD51 Rad51 rad-51 spn-A RAD51 rhp51 gi:18420327
ko:K10873
(DNA repair and recombination protein RAD52)
RAD52 Rad52 RAD52 rad22
rti1
ko:K10881
(26 proteasome complex subunit DSS1)
SHFM1 Shfm1 dss-1 gi:21358401 SEM1 dss1 gi:15241644
gi:18408121
ko:K10869
(RAD51-like protein 1)
RAD51L1 Rad51l1 RAD51B
ko:K10871
(RAD51-like protein 3)
RAD51L3 Rad51l3
ko:K10879
(DNA-repair protein XRCC2)
XRCC2 Xrcc2 XRCC2
ko:K10875
(DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-])
RAD54L Rad54l rad-54 okr RAD54 rhp54 gi:145338703
ko:K10901
(bloom syndrome protein [EC:3.6.4.12])
RECQL3 (BLM) Blm him-6 mus309 SGS1 rqh1 RECQI1
gi:240254298
RECQ4A
ko:K08991
(crossover junction endonuclease MUS81 [EC:3.1.22.-])
MUS81 Mus81 mus-81 mus81 MUS81 mus81 MUS81
gi:240256383
ko:K03629
(DNA replication and repair protein RecF)
RecF
ko:K03553
(recombination protein RecA)
RecA recA3-like
ko:K03550
(holliday junction DNA helicase RuvA [EC:3.6.4.12])
RuvA
ko:K01159
(crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4])
RuvC
ko:K03582
(exodeoxyribonuclease V beta subunit [EC:3.1.11.5])
RecB
ko:K03581
(exodeoxyribonuclease V alpha subunit [EC:3.1.11.5])
RecD
ko:K02686
(primosomal replication protein N)
priB
ko:K04067
(primosomal replication protein N'')
priC
ko:K02317
(DNA replication protein DnaT)
DnaT
ko:K10868
(DNA repair protein XRS2)
XRS2
ko:K10957
(DNA repair protein RAD55)
RAD55
ko:K10958
(DNA repair protein RAD57)
RAD57 rhp57
ko:K10887
(DNA cross-link repair 1C protein [EC:3.1.-.-])
DCLRE1C (Artemis) Dclre1c
ko:K10884
(ATP-dependent DNA helicase 2 subunit 1)
Ku70 (XRCC6) Xrcc6 cku-70 Irbp YKU70 pku70 KU70
ko:K10885
(ATP-dependent DNA helicase 2 subunit 2)
Ku80 (XRCC5) Xrcc5 cku-80 Ku80 YKU80 pku80 KU80
ko:K00977
(DNA nucleotidylexotransferase [EC:2.7.7.31])
DNTT (TdT) Dntt
ko:K10980
(non-homologous end-joining factor 1)
NHEJ1 (Cernunnos) Nhej1
ko:K10982
(ligase-interacting factor 1)
LIF1
ko:K10791
(three prime repair exonuclease 2 [EC:3.1.11.2])
TREX2 Trex2
ko:K10766
(alkylated DNA repair protein alkB homolog 4 [EC:1.14.11.-])
ALKBH4 Alkbh4 gi:25148697 gi:320544830
ko:K10860
(alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 [EC:1.14.11.-])
ALKBH3 Alkbh3
ko:K10886
(DNA-repair protein XRCC4)
XRCC4 Xrcc4 XRCC4
ko:K04728
(ataxia telangectasia mutated family protein [EC:2.7.11.1])
ATM Atm atm-1 tefu TEL1 tel1 ATM
ko:K10768
(alkylated DNA repair protein alkB homolog 6 [EC:1.14.11.-])
ALKBH6 Alkbh6 ALKBH6-like gi:85724924 gi:334186732
ko:K10863
(aprataxin [EC:3.-.-.-])
APTX
ko:K10730
(ATP-dependent DNA helicase Q4 [EC:3.6.4.12])
RECQL4
RECQL4 (RTS)
ko:K10864
(DNA mismatch repair protein PMS1)
PMS1
ko:K10706
(senataxin [EC:3.6.4.-])
SETX
ko:K10889
(fanconi anemia group B protein)
FANCB Fancb
ko:K10890
(fanconi anemia group C protein)
FANCC Fancc
ko:K10892
(fanconi anemia group E protein)
FANCE Fance
ko:K10893
(fanconi anemia group F protein)
FANCF Fancf
ko:K10895
(fanconi anemia group I protein)
FANCI Fanci fnci-1 gi:221330074 gi:186530637
ko:K15362
(fanconi anemia group J protein [EC:3.6.4.12])
BACH1/BRIP1 (FANCJ) Brip1 dog-1 gi:42562202
gi:240254129
ko:K10896
(fanconi anemia group M protein)
FANCM Fancm gi:116008407 gi:15219634
ko:K10897
(partner and localizer of BRCA2)
FANCN (PALB2) Palb2
ko:K01520
(dUTP pyrophosphatase [EC:3.6.1.23])
DUT Dut dut-1 dUTPase DUT1 gi:19114785 dut gi:15232681
ko:K10989
(activation-induced cytidine deaminase [EC:3.5.4.5])
AICDA (AID)
ko:K02350
(DNA polymerase zeta subunit [EC:2.7.7.7])
REV3L
POLζ (POLZ/REV3)
Rev3l polz mus205 REV3 rev3 ATREV3
ko:K13728
(mitotic spindle assembly checkpoint protein MAD2B)
REV7/MAD2L2
ko:K03509
(DNA polymerase eta subunit [EC:2.7.7.7])
POLη (POLH /RAD30A) Polh polh-1 DNApol-eta RAD30 eso1 POLH
ko:K03510
(DNA polymerase iota subunit [EC:2.7.7.7])
POLι (POLI/RAD30B) Poli DNApol-iota
ko:K03511
(DNA polymerase kappa subunit [EC:2.7.7.7])
POLκ (POLK/DINB1) Polk Polk-1 mug40 POLK
ko:K11303
(histone acetyltransferase 1 [EC:2.3.1.48])
HAT1 Hat1 tag-235 gi:24644413 HAT1 hat1 HAG2
ko:K06062
(histone acetyltransferase [EC:2.3.1.48])
KAT2B
KAT2A
Kat2b
Kat2a
pcaf-1 Pcaf GCN5 gcn5 HAG1
ko:K03125
(transcription initiation factor TFIID subunit 1)
TAF1
TAF1L
Taf1
Taf1
taf-1
taf-1
Taf1
Taf1
TAF1
TAF1
taf111
taf111
HAF01
HAF2
HAF01
HAF2
ko:K11308
(histone acetyltransferase MYST1 [EC:2.3.1.48])
MYST1 Myst1 mys-2 mof
gi:24650814
HAM2
HAM1
ko:K11307
(histone acetyltransferase MYST2 [EC:2.3.1.48])
MYST2 Myst2 chm
ko:K11306
(histone acetyltransferase MYST4 [EC:2.3.1.48])
MYST4 Myst4 enok
ko:K11310
(general transcription factor 3C polypeptide 4 [EC:2.3.1.48])
GTF3C4 Gtf3c4 gi:24656139 sfc9
ko:K11408
(histone deacetylase 7 [EC:3.5.1.98])
HDAC7 Hdac7
ko:K11255
(nuclear receptor coactivator 2)
NCOA2 Ncoa2
ko:K02223
(circadian locomoter output cycles kaput protein [EC:2.3.1.48])
CLOCK Clock Clk
ko:K11404
(histone deacetylase 3 [EC:3.5.1.98])
HDAC3 Hdac3 Hdac3
ko:K11405
(histone deacetylase 8 [EC:3.5.1.98])
HDAC8 Hdac8
ko:K11407
(histone deacetylase 6/10 [EC:3.5.1.98])
HDAC6
HDAC10
Hdac10
Hdac6
gi:17540332 HDAC6 HDA1 clr3 HDA18
HDA05
ko:K11411
(NAD-dependent deacetylase sirtuin 1 [EC:3.5.1.-])
SIRT1 Sirt1 sir-2.1 Sir2
ko:K11412
(NAD-dependent deacetylase sirtuin 2 [EC:3.5.1.-])
SIRT2 Sirt2 Sirt2
ko:K11414
(NAD-dependent deacetylase sirtuin 4 [EC:3.5.1.-])
SIRT4 Sirt4 sir-2.3
sir-2.2
Sirt4
ko:K11416
(mono-ADP-ribosyltransferase sirtuin 6 [EC:2.4.2.31])
SIRT6 Sirt6 Sir-2.4 Sirt6 SRT1
ko:K11418
(histone deacetylase 11 [EC:3.5.1.98])
HDAC11 Hdac11 gi:193207430 HdacX HDA2
ko:K06101
(histone-lysine N-methyltransferase ASH1L [EC:2.1.1.43])
ASH1L Ash1l lin-59 ash1
ko:K11420
(euchromatic histone-lysine N-methyltransferase [EC:2.1.1.43])
EHMT2
EHMT1
Ehmt2
Ehmt1
G9a
ko:K09186
(histone-lysine N-methyltransferase MLL1 [EC:2.1.1.43])
MLL Mll1 trx
ko:K10574
(ubiquitin-conjugating enzyme E2 B [EC:6.3.2.19])
RAD6 homolog B Ube2b
ko:K10580
(ubiquitin-conjugating enzyme E2 N [EC:6.3.2.19])
UBE2N
UBC13 (UBE2N)
UBE2NL
Mcg1038069
Ube2n
ubc-13 AT16033p
ben
UBC13 ubc13 UBC36
ko:K10704
(ubiquitin-conjugating enzyme E2 variant)
UBE2V1
MMS2 (UBE2V2)
TMEM189-UBE2V1
TMEM189
Tmem189
Ube2v1
Ube2v2
Y53C10A.5
uev-1
Kua
Uev1A
MMS2 mms2 UEV1D
MMZ1
MMZ3
ko:K01165
(ribonuclease L)
RNASEL Rnasel
ko:K03168
(DNA topoisomerase I [EC:5.99.1.2])
TopA
ko:K02470
(DNA gyrase subunit B [EC:5.99.1.3])
GyrB GYRB1
GYRBM
ko:K03169
(DNA topoisomerase III [EC:5.99.1.2])
TopB
ko:K02622
(topoisomerase IV subunit B [EC:5.99.1.-])
ParE
ko:K09188
(histone-lysine N-methyltransferase MLL3 [EC:2.1.1.43])
MLL3 Mll3 set-16 trr
ko:K01500
APOBEC3C
APOBEC3B
APOBEC3G
APOBEC4
APOBEC3F
APOBEC2
APOBEC3A
APOBEC1
Apobec2
Apobec3
Apobec1
ko:K09189
(histone-lysine N-methyltransferase MLL5 [EC:2.1.1.43])
MLL5 Mll5
ko:K11424
(histone-lysine N-methyltransferase NSD1/2 [EC:2.1.1.43])
WHSC1
NSD1
Nsd1
Whsc1
Mes-4
ko:K11432
(PR domain zinc finger protein 2)
PRDM2 Prdm2
ko:K11423
(histone-lysine N-methyltransferase SETD2 [EC:2.1.1.43])
SETD2 Setd2 Set2 SET2 set2
ko:K11428
(histone-lysine N-methyltransferase SETD8 [EC:2.1.1.43])
SETD8 Setd8 set-1 pr-set7
ko:K11421
(histone-lysine N-methyltransferase SETDB [EC:2.1.1.43])
SETDB2
SETDB1
Setdb2
Setdb1
met-2 egg
ko:K11426
(SET and MYND domain-containing protein)
SMYD2
SMYD3
SMYD1
Smyd2
Smyd3
Smyd1
set-30
set-18
set-14
Bzd set6 SDG37
ko:K11429
(histone-lysine N-methyltransferase SUV420H [EC:2.1.1.43])
SUV420H1
SUV420H2
Suv420h2
Suv420h1
set-4 Suv4-20 set9
ko:K11434
(protein arginine N-methyltransferase 1 [EC:2.1.1.-])
PRMT1 Prmt1 gi:17566490 Art1 HMT1 rmt1 PRMT11
PRMT1A
ko:K11436
(protein arginine N-methyltransferase 3 [EC:2.1.1.-])
PRMT3 Prmt3 Art3 rmt3 PRMT3
ko:K05931
(histone-arginine methyltransferase CARM1 [EC:2.1.1.125])
CARM1 Carm1 Art4 PRMT4B
PRMT4A
ko:K11437
(protein arginine N-methyltransferase 6 [EC:2.1.1.-])
PRMT6 Prmt6 PRMT6
ko:K11439
(protein arginine N-methyltransferase 8 [EC:2.1.1.-])
PRMT8 Prmt8
ko:K11445
(JmjC domain-containing histone demethylation protein 1D/E/F)
JHDM1D Jhdm1d
ko:K06709
(jumonji domain-containing protein 2 [EC:1.14.11.-])
KDM4B
KDM4C
KDM4A
KDM4D
Kdm4d
Kdm4b
Kdm4c
Kdm4a
jmjd-2 Kdm4B
ko:K11447
(histone demethylase [EC:1.14.11.-])
UTY
KDM6A
Uty
Kdm6a
gi:17567315
gi:17550694
tag-279
utx-1
Utx
ko:K11446
(histone demethylase JARID1 [EC:1.14.11.-])
KDM5D
KDM5A
KDM5C
KDM5B
Kdm5a
Kdm5c
Kdm5b
Kdm5d
rbr-2 lid
ko:K11585
(chromobox protein 1)
CBX1 Cbx1 hpl-2 HP1b
HP1e
ko:K11586
(chromobox protein 3)
CBX3 Cbx3
gi:309267436
Gm6901
HP1c
ko:K11587
(chromobox protein 5)
CBX5 Cbx5 Su(var)205
ko:K11592
(endoribonuclease Dicer [EC:3.1.26.-])
DICER1 Dicer1 dcr-1 Dcr-1 dcr1 DCL4
DCL1
ko:K02156
(aubergine)
PIWIL4
gi:310132318
PIWIL3
PIWIL2
PIWIL1
Piwil4
Piwil1
Piwil2
prg-1
prg-2
AGO3
aub
piwi
ko:K11643
(chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12])
CHD4 Chd4 let-418 Mi-2 PKL
ko:K11644
(paired amphipathic helix protein Sin3a)
SIN3A Sin3a sin-3 Sin3A SIN3 pst1 SNL3
SNL4
ko:K05692
(actin beta/gamma 1)
ACTB
ACTG1
Actb
Actg1
act-1
act-2
act-4
act-3
Act42A
Act5C
Act88F
Act57B
Act87E
ACT1 act1
ko:K04499
(RuvB-like protein 1 (pontin 52))
RUVBL1 Ruvbl1 Ruvb-1 pont RVB1 rvb1 RIN1
ko:K11338
(RuvB-like protein 2 [EC:3.6.4.12])
RUVBL2 Ruvbl2 RUVB (ruvb-2) rept RVB2 rvb2 At5g67630
ko:K11662
(actin-related protein 6)
ACTR6 Actr6 Actr13E ARP6 arp6 ATARP6
ko:K11663
(zinc finger HIT domain-containing protein 1)
ZNHIT1 Znhit1 CD4.7 Dmel_CG31917 VPS71 vps71 SEF
ko:K11324
(DNA methyltransferase 1-associated protein 1)
DMAP1 Dmap1 ekl-4 DMAP1 SWC4 swc4 At2g47210
ko:K03006
(DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6])
POLR2A Polr2a ama-1 RpII215 RPO21 rpb1 NRPB1
ko:K03011
(DNA-directed RNA polymerase II subunit RPB3)
POLR2C Polr2c rpb-3 RpII33 RPB3 rpb3 NRPB3
ko:K03012
(DNA-directed RNA polymerase II subunit RPB4)
POLR2D Polr2d rpb-4 Rpb4 RPB4 rpb4 NRPB4
ko:K03018
(DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6])
POLR3A Polr3a rpc-1 gi:281360912 RPO31 rpc1 NRPC1
ko:K03027
(DNA-directed RNA polymerases I and III subunit RPAC1)
POLR1C Polr1c gi:25155095 gi:20129237 RPC40 rpc40
ko:K03023
(DNA-directed RNA polymerase III subunit RPC3)
POLR3C Polr3c gi:17506119 gi:320542649 RPC82 rpc82 gi:18408755
ko:K03025
(DNA-directed RNA polymerase III subunit RPC6)
POLR3F Polr3f gi:17509641 gi:24648960 RPC34 rpc34 gi:15237811
ko:K02999
(DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6])
POLR1A Polr1a gi:71998295 RpI1 RPA190 nuc1 NRPA1
ko:K03005
(DNA-directed RNA polymerase I subunit RPA49)
POLR1E Polr1e gi:21357097 RPA49 rpa49 gi:15231416
ko:K03004
(DNA-directed RNA polymerase I subunit RPA43)
TWISTNB Twistnb gi:24582356 RPA43 rpa43
ko:K03043
(DNA-directed RNA polymerase subunit beta [EC:2.7.7.6])
RpoB RpoB
ko:K03060
(DNA-directed RNA polymerase subunit omega [EC:2.7.7.6])
RpoZ
ko:K03003
(DNA-directed RNA polymerase I subunit RPA34)
RPA34
ko:K10683
(BRCA1-associated RING domain protein 1 [EC:6.3.2.19])
BARD1 Bard1 Brd-1 BARD1
ko:K11653
(AT-rich interactive domain-containing protein 1)
SMARCF1 (ARID1A)
ARID1B
Arid1b
Arid1a
let-526 osa
ko:K11649
(SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C)
SMARCC2
SMARCC1 (SWI3)
Smarcc2
Smarcc1
psa-1 mor ssr1
ssr2
AtSWI3A
CHB3
AtSWI3B
AtSWI3C
ko:K11650
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D)
SMARCD1
SMARCD3
SMARCD2
Smarcd1
Smarcd3
Smarcd2
swsn-2.2
tag-246
Bap60 ssr3 CHC1
At3g01890
ko:K11727
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:3.6.4.-])
SMARCA1 Smarca1
ko:K11661
(helicase SRCAP [EC:3.6.4.-])
SRCAP Srcap
ko:K03530
(DNA-binding protein HU-beta)
HU beta (histone-like)
ko:K11685
(DNA-binding protein StpA)
StpA
ko:K10807
(ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1])
RRM1 Rrm1 rnr-1 RnrL RNR1
RNR3
cdc22 RNR1
ko:K10734
(GINS complex subunit 3)
GINS3 Gins3 Y65B4BR.8 Psf3 PSF3 psf3 PSF3
ko:K10735
(GINS complex subunit 4)
GINS4 Gins4 Y113G7B.24a Sld5 SLD5 sld5 SLD5
ko:K02333
(DNA polymerase gamma 2)
POLG2 Polg2 DNApol-gamma35
ko:K10733
(GINS complex subunit 2)
GINS2 Gins2 F31C3.5 Psf2 PSF2 psf2 PSF2
ko:K02325
(DNA polymerase epsilon subunit 2 [EC:2.7.7.7])
POLE2 Pole2 DNA Pole-2 Pole2 DPB2 dpb2 ATDPB2
ko:K03506
(DNA polymerase epsilon subunit 4 [EC:2.7.7.7])
POLE4 Pole4 DNA Pol epsilon sub 4 Mes4 DPB3 SPCC16C4.22
ko:K02212
(minichromosome maintenance protein 4 (cell division control protein 54))
MCM4 Mcm4 mcm-4 dpa MCM4 cdc21 MCM4
ko:K10878
(meiotic recombination protein SPO11)
SPO11
ko:K10741
(replication factor A4)
RPA4
ko:K10754
(replication factor C subunit 1)
RFC1 Rfc1 rfc-1 Gnf1 RFC1 rfc1 AtRFC1
ko:K10765
(alkylated DNA repair protein alkB homolog 1 [EC:1.14.11.- 4.2.99.18])
ALKBH1 Alkbh1 AlkB At_AlkB
ko:K10743
(ribonuclease H2 subunit A [EC:3.1.26.4])
RNASEH2A Rnaseh2a rnh-2 RNase H2 subunit A RNH201 rnh201 RNase H2 subunit A
ko:K01669
(deoxyribodipyrimidine photo-lyase [EC:4.1.99.3])
phr
TA01342p
Phr1p PhrB PHR1
CRY3
ko:K02342
(DNA polymerase III subunit epsilon [EC:2.7.7.7])
DnaQ
ko:K02343
(DNA polymerase III subunit gamma/tau [EC:2.7.7.7])
DnaX
ko:K02341
(DNA polymerase III subunit delta' [EC:2.7.7.7])
HolB
ko:K02344
(DNA polymerase III subunit psi [EC:2.7.7.7])
HolD
ko:K02338
(DNA polymerase III subunit beta [EC:2.7.7.7])
DnaN
ko:K06640
(serine/threonine-protein kinase ATR [EC:2.7.11.1])
ATR Atr mei-41 rad3 ATRAD3
ko:K10778
(AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63])
Ada
ko:K03019
(DNA-directed RNA polymerase III subunit RPC10)
POLR3K Polr3k gi:17544244 gi:78707272 RPC11 rpc11 gi:15223344
gi:15235876
ko:K07458
(DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-])
Vsr
ko:K03009
(DNA-directed RNA polymerases I, II, and III subunit RPABC4)
POLR2K gi:149271268 rpb-12 gi:161077092 RPC10 rpc10 NRPB12
ko:K01142
(exodeoxyribonuclease III [EC:3.1.11.2])
XthA (exo III) ARP
ko:K03007
(DNA-directed RNA polymerases I, II, and III subunit RPABC5)
POLR2L Polr2l
RPB10 homolog
rpb-10 Rpb10 RPB10 rpb10 NRPB10
gi:15220572
ko:K11126
(telomerase reverse transcriptase [EC:2.7.7.49])
TERT (telomerase catalytic subunit) Tert EST2 trt1 ATTERT
ko:K03652
(DNA-3-methyladenine glycosylase [EC:3.2.2.21])
ANPG (MPG) Mpg gi:15229928
ko:K10567
(endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18])
NEIL1 Neil1
ko:K10569
(endonuclease VIII-like 3)
NEIL3 Neil3 Neil3-like
ko:K10800
(single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-])
SMUG1 Smug1 CG5285
ko:K10771
(AP endonuclease 1 [EC:4.2.99.18])
APEX1 Apex1 apn-1
exo-3
Rrp1 APN1 apn1
ko:K03512
(DNA polymerase lambda subunit [EC:2.7.7.7 4.2.99.-])
POLλ (POLL) mPolλ (mPOLL) DNA Pol lambda
ko:K10798
(poly [ADP-ribose] polymerase [EC:2.4.2.30])
PARP1
PARP4
PARP3
PARP2
Parp3
Parp2
Parp1
Parp4
pme-2
pme-1
Parp APP
PARP2
ko:K05522
(endonuclease VIII [EC:3.2.2.- 4.2.99.18])
Nei (endo VIII)
ko:K01246
(DNA-3-methyladenine glycosylase I [EC:3.2.2.20])
Tag gi:42571455
gi:15241554
gi:79331243
gi:18399721
gi:18410766
gi:15218379
ko:K10902
(ATP-dependent DNA helicase Q5 [EC:3.6.4.12])
RECQL5beta Recql5 rcq-5 RecQ5
ko:K02346
(DNA polymerase IV [EC:2.7.7.7])
DNA Pol IV
ko:K10610
(DNA damage-binding protein 1)
DDB1 Ddb1 ddb-1 pic ddb1 DDB1B
DDB1A
ko:K10838
(xeroderma pigmentosum group C-complementing protein)
XPC Xpc xpc-1 mus210 RAD4
RAD4
rhp42
rhp41
RAD4
ko:K10570
(DNA excision repair protein ERCC-8)
ERCC8 (CSA) Ercc8 RAD28 gi:19112099 gi:22329677
ATCSA-1
ko:K10842
(CDK-activating kinase assembly factor MAT1)
MNAT1 Mnat1 mnat-1 Mat1 TFB3 pmh1 gi:145334183
gi:145334183
ko:K13097
(methylcytosine dioxygenase [EC:1.14.11.-])
TET1 Tet1
ko:K10844
(DNA excision repair protein ERCC-2 [EC:3.6.4.12])
ERCC2 (XPD) Ercc2 gi:71994598 Xpd RAD3 rad15 UVH6
UVH6
ko:K03142
(transcription initiation factor TFIIH subunit 2)
GTF2H2D
GTF2H2C
GTF2H2
Gtf2h2 gi:17555086 Ssl1 SSL1 ssl1 GTF2H2
GTF2H2
ko:K03144
(transcription initiation factor TFIIH subunit 4)
GTF2H4 Gtf2h4 gi:32565796 mrn TFB2 tfb2 gi:42566894
gi:334186626
ko:K10848
(DNA excision repair protein ERCC-4 [EC:3.1.-.-])
ERCC4 (XPF) Ercc4 C47D12.8 mei-9 RAD1 rad16 UVH1
ko:K03723
(transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-])
Mfd
ko:K03657
(DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12])
SRS2 srs2 UvrD
ko:K06223
(DNA adenine methylase [EC:2.1.1.72])
Dam
ko:K11588
(methyl CpG binding protein 2)
MECP2 Mecp2
ko:K11589
(methyl-CpG-binding domain protein 1)
MBD1 Mbd1
ko:K08736
(DNA mismatch repair protein MSH3)
MSH3 Msh3 MSH3 msh3 MSH3
ko:K11590
(methyl-CpG-binding domain protein 2)
MBD2 Mbd2 MBD-like
ko:K03573
(DNA mismatch repair protein MutH)
MutH
ko:K03601
(exodeoxyribonuclease VII large subunit [EC:3.1.11.6])
xseA
ko:K11591
(methyl-CpG-binding domain protein 3)
MBD3 Mbd3
ko:K06625
(cyclin-dependent kinase inhibitor 1A)
CDKN1A (p21) Cdkn1a
ko:K10867
(nijmegen breakage syndrome protein 1)
NBN (NBS1) Nbn nbs NBS1
ko:K08775
(breast cancer 2 susceptibility protein)
BRCA2 (FANCD1) Brca2 BRCA2(IV)
BRCA2B
ko:K08073
(bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78])
PNKP (PNK) Pnkp (Pnk) F21D5.5 Dmel_CG9601 pnk1 At3g14890
ko:K10880
(DNA-repair protein XRCC3)
XRCC3 Xrcc3 spn-B XRCC3
ko:K10877
(DNA repair and recombination protein RAD54B [EC:3.6.4.-])
RAD54B
RAD54B
Rad54b gi:71995707 RDH54
RDH54
rdh54
ko:K03022
(DNA-directed RNA polymerase III subunit RPC8)
POLR3H Polr3h gi:17566938 gi:24662815 RPC25 rpc25 gi:15222202
ko:K10882
(crossover junction endonuclease EME1 [EC:3.1.22.-])
EME1 Eme1 mms4 eme1 gi:240254508
gi:79559555
ko:K03163
(DNA topoisomerase I [EC:5.99.1.2])
TOP1
TOP1mt
Top1mt
Top1
top-1 Top1 TOP1 top1 TOP1BETA
TOP1
ko:K03024
(DNA-directed RNA polymerase III subunit RPC7)
POLR3GL
POLR3G
Polr3gl
Polr3g
gi:28574873 RPC31 rpc31 gi:79324969
ko:K03551
(holliday junction DNA helicase RuvB [EC:3.6.4.12])
RuvB
ko:K03655
(ATP-dependent DNA helicase RecG [EC:3.6.4.12])
RecG gi:186498546
ko:K03583
(exodeoxyribonuclease V gamma subunit [EC:3.1.11.5])
RecC
ko:K04066
(primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-])
PriA
ko:K03013
(DNA-directed RNA polymerases I, II, and III subunit RPABC1)
POLR2E Polr2e rpb-5 Rpb5 RPB5 rpb5 NRPB5
ko:K10959
(DNA repair protein RAD59)
RAD59
ko:K07456
(DNA mismatch repair protein MutS2)
gi:15217840
ko:K02295
(cryptochrome)
CRY2
CRY1
Cry1
Cry2
cry
phr6-4
UVR3
ko:K15340
(DNA cross-link repair 1A protein)
DCLRE1A Dclre1a Snm1 PSO2 pso2 SNM1
ko:K03508
(DNA polymerase zeta subunit [EC:2.7.7.7])
REV7
ko:K06054
(hairy and enhancer of split 1)
HES1 Hes1
ko:K10484
(structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12))
SLX4 Slx4
ko:K11756
(chromatin structure-remodeling complex subunit RSC1/2)
RSC2
RSC1
rsc1
ko:K11759
(chromatin structure-remodeling complex subunit RSC4)
RSC4 rsc4
ko:K11762
(chromatin structure-remodeling complex subunit RSC8)
RSC8
ko:K11764
(chromatin structure-remodeling complex protein RSC14)
LDB7
ko:K11768
(actin-related protein 9)
ARP9 arp9
ko:K11770
(chromatin structure-remodeling complex subunit SFH1)
SFH1 sfh1
ko:K11773
(SWI/SNF complex component SNF6)
SNF6
ko:K11776
(SWI/SNF complex component SWP82)
SWP82
ko:K11681
(helicase SWR1 [EC:3.6.4.12])
SWR1 swr1
ko:K11682
(SWR1-complex protein 3)
SWC3
ko:K14439
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:3.6.4.12])
SMARCAD1 Smarcad1 M03C11.8 Etl1 FUN30 fft2 ETL1
ko:K11110
(telomeric repeat-binding factor 1)
TERF1 Terf1
ko:K11113
(telomeric repeat-binding factor 2-interacting protein 1)
TERF2IP Terf2ip
ko:K11116
(telomere length regulation protein)
TEN1
ko:K09426
(Myb-like DNA-binding protein RAP1)
RAP1
ko:K11132
(telomere elongation protein [EC:2.7.7.-])
EBS1
EST1
ko:K04764
(integration host factor subunit alpha)
IhfA
ko:K11253
(histone H3)
HIST2H3C
H3F3B
H3F3C
HIST1H3F
HIST1H3J
HIST1H3G
HIST1H3B
HIST1H3H
HIST1H3E
HIST3H3
HIST1H3C
HIST1H3A
HIST1H3I
HIST1H3D
H3F3A
HIST2H3A
HIST2H3D
Hist1h3e
Hist1h3i
Hist1h3h
H3f3b
Hist2h3c2-ps
Hist1h3d
Hist1h3f
Hist1h3c
Hist2h3b
H3f3c
H3f3a
Hist1h3g
Hist1h3a
Gm10257
Hist2h3c1
Hist1h3b
his-6
his-42
his-72
his-27
his-45
his-9
his-59
his-71
his-69
his-74
his-55
his-70
his-13
cpar-1
his-32
his-17
his-2
his-25
his-63
his-49
His3:CG33827
His3:CG33851
His3:CG33824
His3:CG33842
His3:CG33839
His3:CG33866
His3:CG33803
His3:CG33818
His3:CG33806
His3:CG33809
His3:CG33833
His3:CG33812
His3:CG33836
His3:CG33857
His3:CG33860
His3:CG31613
His3:CG33830
His3:CG33848
His3.3A
His3:CG33845
His3:CG33863
His3:CG33821
His3:CG33815
His3.3B
His3:CG33854
HHT2
HHT1
hht2
hht1
hht3
HTR12
gi:18390992
gi:79326608
gi:15238916
gi:18416264
gi:15222297
gi:15238430
gi:18416261
gi:15232146
gi:15238433
gi:15222272
MGH3
gi:145334271
gi:15239940
ko:K03120
(transcription initiation factor TFIID TATA-box-binding protein)
TBPL1
TBPL2
TBP
Tbp
Tbpl1
Tbpl2
tbp-1
tlf-1
Trf
Tbp
Trf2
SPT15 tbp1 TBP1
TBP2
ko:K03123
(transcription initiation factor TFIIA small subunit)
GTF2A2 Gtf2a2
THIIA2-like
gi:17556689
gi:17551834
TfIIA-S-2
TfIIA-S
TOA2 gi:19075263 gi:15233829
ko:K03127
(transcription initiation factor TFIID subunit 13)
TAF13 Taf13
Taf13
taf-13 Taf13 TAF13 taf13 TAF13
ko:K03129
(transcription initiation factor TFIID subunit 4)
TAF4
TAF4B
Taf4a
Taf4b
taf-4 Taf4
ko:K03132
(transcription initiation factor TFIID subunit 7)
TAF7L
TAF7
Taf7l
Taf7
taf-7.1
taf-7.2
Taf7 TAF7 ptr6 TAF7
ko:K03134
(transcription initiation factor TFIID subunit 10)
TAF10 Taf10 taf-10 Taf10b
Taf10
TAF10 taf10 TAFII15
ko:K03137
(transcription initiation factor TFIIE subunit beta)
GTF2E2 Gtf2e2 gi:17534359 TfIIEbeta TFA2 tfa2 gi:15235379
gi:15233477
ko:K03139
(transcription initiation factor TFIIF subunit beta [EC:3.6.4.12])
GTF2F2 Gtf2f2 gi:25151550 TfIIFbeta TFG2 tfg2 gi:15222264
gi:334185929
ko:K14535
(transcription initiation factor TFIID subunit 9 / adenylate kinase [EC:2.7.4.3])
TAF9 Taf9
Taf9b
gi:17532769 Ak6 FAP7 gi:19075981 gi:334188524
ko:K14651
(transcription initiation factor TFIID subunit 15)
TAF15 Taf15 gi:17532119
ko:K02469
(DNA gyrase subunit A [EC:5.99.1.3])
GyrA GYRA
ko:K03701
(excinuclease ABC subunit A)
UvrA
ko:K05982
(deoxyribonuclease V [EC:3.1.21.7])
ENDOV Endov Nfi (endo V) AT4G31150
ko:K03656
(ATP-dependent DNA helicase Rep [EC:3.6.4.12])
Rep
ko:K10859
(alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 [EC:1.14.11.-])
ALKBH2 Alkbh2 At_ALKBH2
ko:K10898
(fanconi anemia-associated protein)
FAAP24 Faap24
ko:K10990
(RecQ-mediated genome instability protein 1)
RMI1 Rmi1 gi:25150267 gi:186532706
ko:K03164
(DNA topoisomerase II [EC:5.99.1.3])
TOP2A
TOP2B
Top2b
Top2a
top-2
cin-4
TopII
Y46H3C.4
Top2 TOP2 top2 TOPII
ko:K06642
(DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1])
DNA-PKcs (XRCC7) Prkdc
ko:K03513
(DNA polymerase mu subunit [EC:2.7.7.7])
POLμ (POLM) Polm
ko:K10777
(DNA ligase 4 [EC:6.5.1.1])
LIG4 Lig4 lig-4 Lig4 DNL4 lig4 ATLIG4
ko:K10981
(DNA polymerase IV [EC:2.7.7.7])
POL4 pol4
ko:K11594
(ATP-dependent RNA helicase [EC:3.6.4.13])
DDX3X
DDX3Y
Ddx3y
D1Pas1
Ddx3x
gi:71995718
vbh-1
bel DED1
DBP1
sum3 gi:15227951
gi:79315530
gi:15231074
ko:K10983
(non-homologous end-joining protein 1)
NEJ1
ko:K10770
(alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.-])
ALKBH8 Alkbh8 C14B1.10 Dmel_CG17807 (Alkbh8)
ko:K03919
(alkylated DNA repair protein [EC:1.14.11.-])
AlkB
ko:K10767
(alkylated DNA repair protein alkB homolog 5 [EC:1.14.11.-])
ALKBH5 Alkbh5
ko:K10769
(alkylated DNA repair protein alkB homolog 7 [EC:1.14.11.-])
ALKBH7 Alkbh7 gi:71998257 gi:85726474
ko:K10605
(breast cancer type 1 susceptibility protein)
BRCA1 Brca1
ko:K10888
(fanconi anemia group A protein)
FANCA Fanca
ko:K10891
(fanconi anemia group D2 protein)
FANCD2 Fancd2 fcd-2 Fancd2 gi:240255840
ko:K10894
(fanconi anemia group G protein)
FANCG (XRCC9) Fancg
ko:K10606
(E3 ubiquitin-protein ligase FANCL [EC:6.3.2.19])
FANCL Fancl Fancl AT5G65740
ko:K03574
(7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-])
NUDT1 (MTH1) Nudt1 MutT NUDT1
ko:K10808
(ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1])
RRM2
RRM2B
Rrm2b
Rrm2
rnr-2 RnrS RNR2
RNR4
suc22 RNR2A
TSO2
ko:K02332
(DNA polymerase gamma 1 [EC:2.7.7.7])
POLγ (POLG) Polg Polg-1 tam MIP1 pog1
ko:K03515
(DNA repair protein REV1 [EC:2.7.7.-])
REV1L (REV1) Rev1 rev-1 Rev1 REV1 rev1 REV1
ko:K02349
(DNA polymerase theta subunit [EC:2.7.7.7])
POLθ (POLQ) Polq polq-1 mus308 TEBICHI
ko:K10790
(three prime repair exonuclease 1 [EC:3.1.11.2])
TREX1 (DNase III) Trex1
ko:K04498
(E1A/CREB-binding protein [EC:2.3.1.48])
CREBBP
EP300
Crebbp
Ep300
cbp-1 nej HAC1
HAC5
HAC2
HAC4
HAC12
ko:K11304
(histone acetyltransferase HTATIP [EC:2.3.1.48])
KAT5 Kat5 mys-1 Tip60 ESA1 mst1
ko:K11305
(histone acetyltransferase MYST3 [EC:2.3.1.48])
MYST3 Myst3
ko:K07739
(elongator complex protein 3 [EC:2.3.1.48])
ELP3 Elp3 elpc-3 Elp3 ELP3 elp3 ELO3
ko:K09101
(nuclear receptor coactivator 1 [EC:2.3.1.48])
NCOA1 Ncoa1
ko:K11256
(nuclear receptor coactivator 3 [EC:2.3.1.48])
NCOA3 Ncoa3
ko:K06067
(histone deacetylase 1/2 [EC:3.5.1.98])
HDAC1
HDAC2
Hdac1
Hdac2
hda-2
hda-3
hda-1
Rpd3 RPD3 clr6 HD1
hda17
HDA6
HDA7
HDA9
ko:K11406
(histone deacetylase 4/5 [EC:3.5.1.98])
HDAC5
HDAC4
Hdac5
Hdac4
Hda-4 HDAC4
ko:K11409
(histone deacetylase 9 [EC:3.5.1.98])
HDAC9 Hdac9
ko:K11413
(NAD-dependent deacetylase sirtuin 3 [EC:3.5.1.-])
SIRT3 Sirt3
ko:K11415
(NAD-dependent deacetylase sirtuin 5 [EC:3.5.1.-])
SIRT5 Sirt5
ko:K10993
(fanconi anemia core complex 100 kDa subunit)
FAAP100 Faap100
ko:K11137
(telomere length regulation protein)
TELO2 Telo2 clk-2 TEL2 tel2 gi:30693041
ko:K11511
(centromere protein S)
APITD1 Apitd1
ko:K11832
(ubiquitin carboxyl-terminal hydrolase 1 [EC:3.1.2.15])
USP1 Usp1 gi:281362798
ko:K13960
(ubiquitin-conjugating enzyme E2 T [EC:6.3.2.19])
UBE2T Ube2t UBC37
ko:K15078
(structure-specific endonuclease subunit SLX1 [EC:3.6.1.-])
SLX1B
SLX1A
Slx1b gi:17507665 gi:281360057 SLX1 slx1 gi:15239808
gi:42569467
ko:K15079
(structure-specific endonuclease subunit SLX4)
SLX4
ko:K15360
(centromere protein X)
STRA13 Stra13 gi:17540166 gi:145327735
ko:K15361
(WD repeat-containing protein 48)
WDR48 Wdr48 gi:212645782 gi:24652663 gi:19113838 gi:18397118
ko:K15363
(fanconi-associated nuclease 1)
FAN1 Fan1 gi:17538392 gi:19112187 gi:186489458
ko:K15364
(RecQ-mediated genome instability protein 1)
RMI1 rmi1
ko:K15365
(RecQ-mediated genome instability protein 2)
RMI2 Rmi2 gi:15223204
ko:K02831
(ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-])
RAD53 cds1
ko:K02633
(period circadian protein)
PER2
PER3
PER1
Per1
Per2
Per3
per
ko:K06661
(DNA repair protein RAD9)
RAD9
ko:K15081
(antagonist of mitotic exit network protein 1)
AMN1
ko:K06662
(cell cycle checkpoint protein)
RAD17 Rad17 hpr-17 Rad17 RAD24 rad17 AtRAD17
ko:K10994
(cell cycle checkpoint control protein RAD9A [EC:3.1.11.2])
RAD9A Rad9 hpr-9 Rad9 rad9 RAD9
ko:K10903
(HUS1 checkpoint protein)
HUS1 Hus1 hus-1 Hus1-like hus1 AtHus1
ko:K10996
(checkpoint protein HUS1B)
HUS1B Hus1b
ko:K02544
(G2-specific checkpoint protein)
MEC3
ko:K03155
(timeless)
TIMELESS Timeless tim-1 timeout ATIM
ko:K10904
(TIMELESS-interacting protein)
TIPIN Tipin tipin tipin
ko:K10998
(replication fork protection complex subunit Csm3/Swi3)
CSM3 swi3
ko:K01356
(repressor LexA [EC:3.4.21.88])
LexA
ko:K11309
(regulator of Ty1 transposition protein 109)
RTT109 rtt109
ko:K11482
(histone deacetylase HOS1 [EC:3.5.1.98])
HOS1
ko:K11484
(histone deacetylase HOS3 [EC:3.5.1.98])
HOS3
ko:K10862
(tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-])
TDP1 Tdp1 Tdp1 Dmel_Tdp1 Tdp1p Tdp1 Ath_TDP1
ko:K11417
(NAD-dependent deacetylase sirtuin 7 [EC:3.5.1.-])
SIRT7 Sirt7 Sirt7
ko:K11427
(histone-lysine N-methyltransferase, H3 lysine-79 specific [EC:2.1.1.43])
DOT1L Dot1l gi:71991708
gi:71994293
gi:17568207
gi:17570285
gpp DOT1
ko:K11430
(enhancer of zeste [EC:2.1.1.43])
EZH1
EZH2
Ezh1
Ezh2
E(z) MEA
SWN
CLF
ko:K09187
(histone-lysine N-methyltransferase MLL2 [EC:2.1.1.43])
MLL2 Mll2
ko:K14959
(histone-lysine N-methyltransferase MLL4 [EC:2.1.1.43])
MLL4 Wbp7
ko:K11425
(histone-lysine N-methyltransferase NSD3 [EC:2.1.1.43])
WHSC1L1 Whsc1l1
ko:K11422
(histone-lysine N-methyltransferase SETD1 [EC:2.1.1.43])
SETD1B
SETD1A
Setd1a
Setd1b
set-2 gi:62862148 SET1 set1
ko:K11431
(histone-lysine N-methyltransferase SETD7 [EC:2.1.1.43])
SETD7 Setd7
ko:K11433
(histone-lysine N-methyltransferase SETMAR [EC:2.1.1.43])
SETMAR Setmar set-23 gi:161078181
ko:K11419
(histone-lysine N-methyltransferase SUV39H [EC:2.1.1.43])
SUV39H2
SUV39H1
Suv39h1
Suv39h2
Su(var)3-9 clr4
ko:K11593
(eukaryotic translation initiation factor 2C)
EIF2C3
EIF2C1
EIF2C4
EIF2C2
Eif2c1
Eif2c2
Eif2c4
Eif2c3
alg-2
alg-1
AGO1
ko:K11435
(protein arginine N-methyltransferase 2 [EC:2.1.1.-])
PRMT2 Prmt2
ko:K02516
(protein arginine N-methyltransferase 5 [EC:2.1.1.125])
PRMT5 Prmt5 prmt-5 csul HSL7 skb1 SKB1
ko:K11438
(protein arginine N-methyltransferase 7 [EC:2.1.1.-])
PRMT7 Prmt7 gi:17509621 Art7 PRMT7
ko:K10276
(F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27])
KDM2B
KDM2A
Kdm2b
Kdm2a
gi:32565554 gi:281361422 JHD1 epe1
ko:K11449
(jumonji domain-containing protein 1 [EC:1.14.11.-])
KDM3B
KDM3A
JMJD1C
Kdm3a
Kdm3b
Jmjd1c
gi:28571604 gi:186478394
ko:K11448
(histone demethylase JMJD3 [EC:1.14.11.-])
KDM6B Kdm6b
ko:K11450
(lysine-specific histone demethylase 1 [EC:1.-.-.-])
KDM1A Kdm1a spr-5
lsd-1
Su(var)3-3 LDL2
LDL1
FLD
ko:K10507
(zinc finger and BTB domain-containing protein 33)
ZBTB33 Zbtb33
ko:K11642
(chromodomain-helicase-DNA-binding protein 3 [EC:3.6.4.12])
CHD3 Chd3
ko:K11648
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1)
SMARCB1 (SNF5) Smarcb1 snfc-5 Snr1 SNF5 snf5 BSH
ko:K14721
(DNA-directed RNA polymerase III subunit RPC5)
POLR3E Polr3e gi:17555494 Sin RPC37 rpc37 gi:15240503
ko:K11341
(YEATS domain-containing protein 4)
YEATS4 Yeats4 gfl-1 Gas41 YAF9 yaf9 GAS41
ko:K11664
(vacuolar protein sorting-associated protein 72)
VPS72 Vps72 C17E4.6 YL-1 VPS72 swc2 SWC2
ko:K03010
(DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6])
POLR2B Polr2b rpb-2 RpII140 RPB2 rpb2 NRPB2
ko:K03008
(DNA-directed RNA polymerase II subunit RPB11)
POLR2J
POLR2J2
POLR2J3
Polr2j rpb-11 Rpb11 RPB11 rpb11 NRPB11
ko:K03021
(DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6])
POLR3B Polr3b gi:25144348 RpIII128 RET1 rpc2 NRPC2
ko:K03020
(DNA-directed RNA polymerases I and III subunit RPAC2)
POLR1D Polr1d gi:17553746 l(2)37Cg RPC19 rpc19 gi:79323435
ko:K11120
(regulatory protein SIR1)
SIR1
ko:K11122
(regulatory protein SIR3)
SIR3
ko:K11123
(regulatory protein SIR4)
SIR4
ko:K11596
(argonaute)
ago1 AGO5
AGO1
ZLL
ko:K11597
(RNA-induced transcriptional silencing complex protein Tas3)
tas3
ko:K11700
(poly(A) RNA polymerase Cid12 [EC:2.7.7.19])
cid12
ko:K00525
(ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1])
nrdE
nrdA
ko:K11340
(actin-like protein 6A)
ACTL6A Actl6a
ko:K11652
(actin-like protein 6B)
ACTL6B Actl6b swsn-6 Bap55
ko:K11656
(chromatin accessibility complex protein 1)
CHRAC1 Chrac1 Chrac-16
ko:K11659
(histone-binding protein RBBP7)
RBBP7 Rbbp7
ko:K11728
(nucleosome-remodeling factor subunit BPTF)
BPTF Bptf nurf-1 E(bx)
ko:K11665
(DNA helicase INO80 [EC:3.6.4.12])
INO80 Ino80 Ino80 INO80 ino80 INO80
ko:K11666
(INO80 complex subunit B)
INO80B Ino80b CG10395
ko:K11667
(INO80 complex subunit C)
INO80C Ino80c CG12659 IES6 ies6 INO80 complex subunit C
ko:K11668
(INO80 complex subunit D)
INO80D Ino80d
ko:K11670
(TCF3 fusion partner)
TFPT Tfpt
ko:K11671
(nuclear factor related to kappa-B-binding protein)
NFRKB Nfrkb Dmel_CG11970
ko:K11673
(actin-related protein 8)
ACTR8 Actr8 Arp8 ARP8 arp8 ATARP9
ko:K11674
(microspherule protein 1)
MCRS1 Mcrs1 H28O16.2 Rcd5
ko:K11675
(Ino eighty subunit 1)
IES1
ko:K11677
(Ino eighty subunit 3)
IES3
ko:K11678
(Ino eighty subunit 4)
IES4
ko:K11679
(Ino eighty subunit 5)
IES5
ko:K11400
(actin-related protein 4)
ARP4 arp42
alp5
ko:K11758
(chromatin structure-remodeling complex subunit RSC3/30)
RSC30
RSC3
YHR054C
ko:K11760
(chromatin structure-remodeling complex subunit RSC6)
RSC6
ko:K11761
(chromatin structure-remodeling complex protein RSC7)
NPL6 snf59
rsc7
ko:K11763
(chromatin structure-remodeling complex subunit RSC9)
RSC9 rsc9
ko:K11766
(chromatin structure-remodeling complex subunit RSC58)
RSC58 rsc58
ko:K11767
(actin-related protein 7)
ARP7
ko:K11769
(chromatin structure-remodeling complex protein HTL1)
HTL1
ko:K11771
(SWI/SNF chromatin-remodeling complex subunit SWI1)
SWI1 sol1
ko:K11772
(SWI/SNF complex subunit SWI3)
SWI3
ko:K11774
(SWI/SNF complex component SNF11)
SNF11
ko:K11775
(SWI/SNF complex component SWP73)
SNF12
ko:K11786
(ATP-dependent helicase STH1/SNF2 [EC:3.6.4.-])
STH1
SNF2
snf21
snf22
ko:K07478
(putative ATPase)
ATPase WRNIP1
ko:K03026
(DNA-directed RNA polymerase III subunit RPC4)
POLR3D Polr3d gi:28574864 RPC53 rpc53 gi:79486517
ko:K03002
(DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6])
POLR1B Polr1b gi:17506623 RpI135 RPA135 rpa2 NRPA2
ko:K03000
(DNA-directed RNA polymerase I subunit RPA12)
ZNRD1 Znrd1 gi:17558010 RpI12 RPA12 rpa12 gi:18404735
ko:K03040
(DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6])
RpoA RpoA
ko:K03046
(DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6])
RpoC RpoC2
RpoC1
ko:K03001
(DNA-directed RNA polymerase I subunit RPA14)
RPA14
ko:K10752
(histone-binding protein RBBP4)
RBBP4 Rbbp4 rba-1
lin-53
Caf1 HAT2 pcf3
mis16
prw1
MSI2
MSI3
MSI1
FVE
NFC5
ko:K10147
(protein phosphatase 1D (formerly 2C) [EC:3.1.3.16])
PPM1D Ppm1d
ko:K11654
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-])
SMARCA5 (ISWI) Smarca5 isw-1 Iswi CHR17
CHR11
ko:K11651
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1)
SMARCE1 Smarce1 swsn-3 dalao
ko:K11647
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-])
SMARCA2
SMARCA4
Smarca4
Smarca2
psa-4
C52B9.8
brm ATCHR12
At5g19310
ko:K14440
(SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12])
SMARCAL1 Smarcal1 SMARCAL1-like Marcal1 CHR18
ko:K05787
(DNA-binding protein HU-alpha)
HU alfa (histone-like)
ko:K03746
(DNA-binding protein H-NS)
Hns
ko:K10573
(ubiquitin-conjugating enzyme E2 A [EC:6.3.2.19])
RAD6 homolog A Ube2a ubc-1 UbcD6 RAD6 rhp6 UBC3
UBC1
ATUBC2
ko:K10627
(E3 ubiquitin-protein ligase RAD18 [EC:6.3.2.19])
RAD18 Rad18 RAD18 rhp18
ko:K10899
(ATP-dependent DNA helicase Q1 [EC:3.6.4.12])
RECQL1 Recql gi:71987993 RECQL2
ko:K02543
(cell cycle checkpoint protein MEC1)
MEC1
ko:K02830
(cell cycle checkpoint protein [EC:3.1.11.2])
RAD1 Rad1 mrt-2 Rad1 RAD17 rad1 AtRad1
ko:K10995
(cell cycle checkpoint control protein RAD9B)
RAD9B Rad9b
ko:K06663
(DNA damage checkpoint protein)
DDC1
ko:K10997
(replication fork protection complex subunit Tof1/Swi1)
TOF1 swi1
ko:K03631
(DNA repair protein RecN (Recombination protein N))
RecN
ko:K11483
(histone deacetylase HOS2 [EC:3.5.1.98])
HOS2 hos2
ko:K11121
(NAD-dependent histone deacetylase SIR2 [EC:3.5.1.-])
HST2
HST1
SIR2
sir2
hst2
ko:K11595
(chromo domain-containing protein 1)
chp1
ko:K11699
(RNA-dependent RNA polymerase 1 [EC:2.7.7.48])
rdp1
ko:K11701
(helicase required for RNAi-mediated heterochromatin assembly 1 [EC:3.6.4.13])
hrr1
ko:K00526
(ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1])
gi:17567153 nrdB
nrdF
ko:K11660
(metastasis-associated protein MTA)
MTA1
MTA3
MTA2
Mta2
Mta3
Mta1
lin-40 MTA1-like
ko:K11726
(nucleosome-remodeling factor 38 kDa subunit [EC:3.6.1.1])
Nurf-38
ko:K11669
(INO80 complex subunit E)
INO80E Ino80e AT13868p
ko:K11672
(actin-related protein 5)
ACTR5 Actr5 Arp5 ARP5 arp5 ATARP5
ko:K11683
(SWR1-complex protein 7)
SWC7
ko:K11684
(bromodomain-containing factor 1)
BDF2
BDF1
SPAC631.02
bdf1
ko:K11273
(chromosome transmission fidelity protein 1 [EC:3.6.4.13])
helicase DDX11 (CHLR1)
ko:K11109
(protection of telomeres protein 1)
POT1 Pot1b
Pot1a
pot1
ko:K11111
(telomeric repeat-binding factor 2)
TERF2 Terf2
ko:K11112
(TERF1-interacting nuclear factor 2)
TINF2 Tinf2
ko:K11114
(adrenocortical dysplasia protein)
ACD Acd
ko:K11115
(cell division control protein 13)
CDC13
ko:K11117
(protein STN1)
STN1
ko:K11118
(RAP1-interacting factor 1)
RIF1
ko:K11119
(RAP1-interacting factor 2)
RIF2
ko:K11124
(protein SMG6 [EC:3.1.-.-])
SMG6 Smg6 smg-6 Smg6
ko:K11125
(protein SMG5)
SMG5 Smg5 Smg5
ko:K11127
(telomerase protein component 1)
TEP1 Tep1
ko:K11133
(telomere replication protein)
EST3
ko:K05788
(integration host factor subunit beta)
IhfB
ko:K11275
(histone H1/5)
HIST1H1D
HIST1H1E
H1FX
HIST1H1A
HIST1H1B
HIST1H1C
HIST1H1T
H1F0
Hist1h1b
Hist1h1d
Hist1h1t
Hist1h1a
H1f0
Hist1h1c
H1fx
Hist1h1e
hil-6
hil-5
his-24
hil-4
hil-3
hil-2
His1:CG33816
His1:CG33861
His1:CG33801
His1:CG33855
His1:CG33834
His1:CG33819
His1:CG33837
His1:CG33840
His1:CG33810
His1:CG33846
His1:CG33807
His1:CG33831
His1:CG33849
His1:CG33858
His1:CG33822
His1:CG33828
His1:CG33864
His1:CG33843
His1:CG31617
His1:CG33852
His1:CG33813
His1:CG33804
His1:CG33825
HHO1 gi:15224536
gi:15222199
HIS1-3
ko:K11251
(histone H2A)
HIST1H2AL
HIST1H2AD
H2AFJ
HIST2H2AA3
HIST1H2AJ
HIST1H2AB
HIST1H2AC
H2AFX
HIST2H2AB
HIST1H2AE
HIST1H2AG
HIST1H2AH
H2AFZ
H2AFB3
HIST2H2AA4
HIST3H2A
H2AFY2
H2AFB1
HIST1H2AI
HIST1H2AK
HIST1H2AA
H2AFV
H2AFB2
H2AFY
HIST2H2AC
HIST1H2AM
Gm14479
Gm14475
Hist1h2ah
Gm6026
Hist1h2ai
Gm14483
Hist2h2ab
Hist1h2ac
H2afv
H2afb1
H2afz
Gm14482
Gm5132
Gm14476
Hist2h2aa1
Hist1h2aa
Gm14484
Hist1h2ak
Hist1h2ao
Gm14477
Hist1h2af
Hist2h2ac
Hist2h2aa2
H2afy2
Hist1h2ab
Gm14478
Hist1h2ae
H2afy
Hist3h2a
Hist1h2ad
1700012L04Rik
Gm14501
HisH2A
H2afj
Hist1h2an
Gm4906
Gm5382
Hist1h2ap
HisH2A
Hist1h2ag
H2afx
his-3
his-33
his-12
his-30
htz-1
his-47
his-43
his-68
gi:17544704
his-57
his-61
his-65
his-51
his-19
his-21
his-7
his-35
his-16
his-53
His2A:CG33808
His2A:CG33853
His2A:CG33838
His2A:CG33841
His2A:CG33859
His2A:CG33850
His2A:CG33865
His2A:CG33847
His2A:CG33844
His2Av
His2A:CG33814
His2A:CG33832
His2A:CG33829
His2A:CG33862
His2A:CG31618
His2A:CG33826
His2A:CG33817
His2A:CG33823
His2A:CG33820
His2A:CG33835
His2A:CG33856
HTZ1
HTA1
HTA2
hta1
hta2
pht1
HTA9
HTA7
HTA2
RAT5
HTA8
HTA6
HTA12
gi:15221875
HTA4
HTA13
H2AXA
HTA11
HTA10
ko:K11252
(histone H2B)
HIST1H2BI
HIST1H2BO
HIST3H2BB
HIST1H2BF
H2BFM
HIST1H2BM
HIST1H2BK
HIST2H2BE
HIST1H2BJ
HIST1H2BA
HIST1H2BE
HIST2H2BF
HIST1H2BB
HIST1H2BC
H2BFWT
HIST1H2BL
HIST1H2BH
HIST1H2BG
HIST1H2BD
HIST1H2BN
Hist1h2bg
Hist2h2bb
Hist1h2br
Hist1h2bf
Hist1h2bl
Hist1h2bj
Hist1h2bh
Hist3h2bb-ps
Hist1h2bc
Hist1h2bq
Hist1h2bk
Hist3h2ba
1700014N06Rik
Hist2h2be
Hist1h2ba
Hist1h2bp
Hist1h2bn
Hist1h2be
Hist1h2bm
Hist1h2bb
1700024P04Rik
his-20
his-58
his-44
his-22
his-29
his-52
his-66
his-62
his-11
his-8
his-39
his-48
his-15
his-54
his-34
his-41
his-4
His2B:CG33876
His2B:CG33882
His2B:CG33874
His2B:CG33908
His2B:CG33868
His2B:CG33884
His2B:CG33910
His2B:CG33902
His2B:CG33898
His2B:CG33872
His2B:CG33904
His2B:CG33892
His2B:CG33870
His2B:CG33880
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG17949
His2B:CG33890
His2B:CG33886
His2B:CG33894
His2B:CG33878
His2B:CG33896
HTB2
HTB1
htb1 gi:15224292
gi:15223150
HTB9
gi:15226943
gi:15232689
HTB11
gi:15241858
HTB4
gi:15231854
HTB2
HTB1
ko:K11254
(histone H4)
HIST1H4L
HIST1H4A
HIST2H4B
HIST4H4
HIST2H4A
HIST1H4B
HIST1H4F
HIST1H4J
HIST1H4K
HIST1H4I
HIST1H4D
HIST1H4H
HIST1H4G
HIST1H4C
HIST1H4E
Hist1h4a
Hist1h4n
Hist1h4k
Hist1h4m
Hist1h4b
Hist1h4d
Hist4h4
Hist1h4j
Hist1h4f
Hist1h4h
Hist1h4i
Hist1h4c
Hist2h4
his-64
his-31
his-37
his-26
his-1
his-46
his-67
his-28
his-14
his-5
his-56
his-10
his-60
his-38
his-18
his-50
His4:CG31611
His4:CG33905
His4:CG33893
His4:CG33897
His4:CG33877
His4r
His4:CG33883
His4:CG33881
His4:CG33907
His4:CG33869
His4:CG33885
His4:CG33891
His4:CG33895
His4:CG33903
His4:CG33871
His4:CG33909
His4:CG33873
His4:CG33875
His4:CG33901
His4:CG33887
His4:CG33879
His4:CG33889
His4:CG33899
HHF1
HHF2
hhf3
hhf1
hhf2
gi:15232318
HIS4
gi:18424269
gi:18390815
gi:145323776
gi:18424305
gi:30692704
gi:15231283
ko:K02621
(topoisomerase IV subunit A [EC:5.99.1.-])
ParC